Detailed information of Paelopatides38542 in Paelopatides sp. Yap Gene info
Gene IDAnnotationContigStartEndStrand
Paelopatides38542E3 UBIQUITIN-PROTEIN LIGASE TRIP12utg1524302559447215-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
Ubiquitin FamilyE3|E3 activity|HECT

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00632HECTHECT-domain (ubiquitin-transferase)DomainInterproscan
PF07738Sad1_UNCSad1 / UNC-like C-terminal FamilyInterproscan
PF13857Ank_5Ankyrin repeats (many copies)RepeatInterproscan
PF14529Exo_endo_phos_2Endonuclease-reverse transcriptase DomainInterproscan
PF18410BTHBBasic tilted helix bundle domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000569DomainHECT domainInterproscan
IPR002110RepeatAnkyrin repeatInterproscan
IPR005135DomainEndonuclease/exonuclease/phosphataseInterproscan
IPR008979Homologous_superfamilyGalactose-binding-like domain superfamilyInterproscan
IPR011989Homologous_superfamilyArmadillo-like helicalInterproscan
IPR012919DomainSUN domainInterproscan
IPR016024Homologous_superfamilyArmadillo-type foldInterproscan
IPR035983Homologous_superfamilyHECT, E3 ligase catalytic domainInterproscan
IPR036691Homologous_superfamilyEndonuclease/exonuclease/phosphatase superfamilyInterproscan
IPR036770Homologous_superfamilyAnkyrin repeat-containing domain superfamilyInterproscan
IPR041200DomainFKBP3, basic tilted helix bundle domainInterproscan
IPR045322FamilyE3 ubiquitin-protein ligase HECTD1/TRIP12-likeInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR45670E3 UBIQUITIN-PROTEIN LIGASE TRIP12Interproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000209Biological Processprotein polyubiquitinationInterproscan
GO:0003824Molecular Functioncatalytic activityInterproscan
GO:0004842Molecular Functionubiquitin-protein transferase activityInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0006511Biological Processubiquitin-dependent protein catabolic processInterproscan
GO:0016607Cellular Componentnuclear speckInterproscan
GO:0043161Biological Processproteasome-mediated ubiquitin-dependent protein catabolic processInterproscan
GO:0048856Biological Processanatomical structure developmentInterproscan
GO:0061630Molecular Functionubiquitin protein ligase activityInterproscan
GO:0070534Biological Processprotein K63-linked ubiquitinationInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
------

TOP