Gene detail

Detailed information of Paelopatides03925 in Paelopatides sp. Yap Gene info

Gene ID	Annotation	Contig	Start	End	Strand
Paelopatides03925	SUPPRESSOR OF FUSED	ctg135	133307	182876	-

Gene Structure

More details in Jbrowse Sequence

CDS

Paelopatides03925

ATGGAAACCACCGATTCTCAAGGCGGTGCTGTGGGTGCTCCTTTACCGGGCGTACCGGTTGGGTTGGAAGCTGTTTATGCCTCTTGCAGAGCCCTGTATCCAAGTCAACCTAACCCTTTGCAAGTAACTGCAGTTGTAAAGTTTTGGCTTGGAGGTCCAGATCCACTTGACTACATTAGTATGTACAGTAACCCTGGCGACCCGCAACGGAATATTCCATCCCACTGGCATTACATCAGTTTTGGGCTATCAGATCTCCACGGTGATGGCCGAGTGCATGAACCAATCAACGCTAACGATGGACCAAGTGGCTTTGGGTTTGAGTTGTCCTTCCGATTAAAGAAAGAATCAACAGAAACAGCACCCCCTACATGGCCAGCTGAATTAATGCAAGGTCTTGCAAGATATGTTTTCCAGTCAGAGAACACATTGTGTAGTGGGGACCATGTTCCATGGCATGCATCTCTGGACAACTCGGAGTCTAGAATACAACACATGCTGATGTGCGAGGACCCACAGTTACAGACGATTCAAACTCCTCATGGCTATCTCAACTTCATGCAGATAGTTGGGGTATGCTCTGAAGAACTCCAAGCAGCTCAAAGATGGAATGGACCAGGTGTCTTGGAACTTCTGCGATCCATTCCAGTTGCTGGTGGTTCCTGGCTTATCACTGATATGAGGAGAGGAGAGTCCATCTTTGATATAAATCCACAGTTGCAGGACGAAGTTGAGAATGGTATCGATAACGAAGGTTCCAACCTAAGTGGCGTGAGCGCAAAGTGCTCCTGGGAAGAACTTGATGACATGGGGGAGCCTTCAGAGCAGTCTTCTCCAAGAATAACAAAATTTGAATCTGAGCAGATAAGAAATGCTCTAATGATGGGGCTGGCCAGAGAGAAGACTCCTCTTCCATCCATATCCAGGAAAGATTCTGACAAGTCGTCCTCACTAGACGAGGAATTGGAGCATCGAAGGTCATCATTCCAAAGTGACGTAGAGTCGCAATCTAACATTTTAGAGCTTGGGAATCCCAGGGTAATAAACGCTGTGAAACTCAACATCAACCTAGAGGCCGGGTCTCTCTTACCACTTGCTCTAAGAGGACGGCTGAAACACGGAAGACATTTTACGTTTAAGGGTTTAAACGGGGACTGTGCAATTACTCTGGTATCTCCGAGAGTGGAAGGTGCTTTTGTGGATACTACTCATCCCTTTGGTGCCAGAGGTCCGTGGATGCAGATATTACTGACCGATGACTTTGTGGATGTGATGGCCATGGACTTGGATGACTTGAATAACCCAGAGTCTATGAAGGAATCTGTTAAATGTTTTGCGGGACTTCAGCCATGGAAAAGAACAATAGATGAATTAGTTTCAGTCAGGAAACCTACTAGAAGAGGAACAAAGGCTGGTAGTAAATTCAGGAGGCGCATTCCAGTGCTGAATGGAGATTTGAGATGGAATATCACAAACAACAATGAGGGTAAACAATCAGGGATTAACATCAACAACCTAATTCAGATTTCCTCAGGCTTTAAAGGGACATACCACAAGGAAATGCAGTATGAAATACAAACTGTGATTATGCCAAGGTTTTTGAATCATGCTAGAACTATCAAAACTCACCAAAACAGACATAATTTGCATGTTATTAGAAGGGACCATATGCCCGTTCTCCTGCATACCCATTCATTAAGAGTGTACTTACAAAATGTTCGCTCTATCAGTAATAAAGCAATATCTATATCTGACTTTGTTATCTCGAATGATATCGACATTTTGGCACTTACTGAAACATGGCTCGGAAGCACAACTGATAACTCAATGGTGAATAACCTTGTCCCCACAGGTTATGAATTTGAACATGTTCCCCGTTCCATCGGTAAAACTGGAGGAGGGGTCGGTGTGTTATTTAAATCCGGATTATCACTGAAGATTAAAACCTCGACTAGGGATAATCTATACACGCATTTTGAACACATGGATTGCTATGTTAGCAATAAAGATTTGCAATTTGCATTAAGTATCATATATCGACCCCCTCCCTCTTCCAAAAATGGTTTCAAAAACTCTATATTTTTTGATGAATGGGCGCTTTATCTTGAAAACATAACTGCTAAGACAGAACATGTAACCATTGTTGGCGACTTGAATTTCCACCTGGATGACCAACAAAATACTGATTCACAAAAGTTTTCAAGACTGTTAAATGTTCATGGTTTAAAGCAGCACGTCGTTGGTGCCACCCATCGTGCTGGCCATACCCTGGATGTAGTAATTACCAGGGAGCATACTGATCTACTCAATGGACCACCTTCCGTTGTTGACGCATGCCTTGGTGATATGAGTGGAAATTCGATTTGCGATCATTACGCCGTTAGATTTGACATCAACACGCGCAAGCCAGATCATATTCGCAAAGTAACAACATTCAGAAAGTTCAGTGATATCAATGTGCCTGATTTTATTGAGGACCTAAAAAAGTGTGAACCTCTAAAGAATGTCAACCGCCCGGTTGAGGAGCTTGTAGCCACGTACAATAACGAGTTGATCAAACTATTGGATCGCCATGCACCAGAATGCACCAAGACAATTACTTTGAGACCCAACACTCCATGGTATACAGATGCCCTTAGACAAGCAAAACATGAACGAAGGAAGGCTGAAAGGAATTGGAGGAAGACACGTCTTACTATCCACTGGCAAATCTTTAAGGATAAATGTAAAGTTGTGAATTCACTTTTAGCTCAAGAAAAGTGGAACTATTATTGCAACAAAATTGAGGAATGTGGAAGTGATCAAAGGCGTCTTTTTAGTTTAACCAAAGACTTGATGGGTGCACGGAATGATGCCAAATTGCCAGCGCATGCATGTACCAAAACTCTTGCTAATCAGTTTGGTGATTTCTTTATTAGCAAAGTAACAGCAATTCGTGATGAATTTGTGACATGTGTTTCCACGCCCATCGCTGATATATTGGCAGATGATAGCAACTTTGATGGCCACCCTCTAGCGTTCTTTTCTCCAGCCACTGAGGAAGAAGGAGAACTACCTAAGCATTTCCAGTGGCCAGACCATAATTTTTCATTGACATTGAAGGCAGATGACTAA

Transcript

Paelopatides03925

GTGTTGGTTTGTCAATTACTAAGCGACGTGCTGATATTTTTCTTCAAATAGAAATATACATAATTAATTAGGGTTTGTTGAAGCACAGGAGACGGACCCTTGTTTGGACGGCACGGTGCCTGCTGTTTTAAGGATGGAAACCACCGATTCTCAAGGCGGTGCTGTGGGTGCTCCTTTACCGGGCGTACCGGTTGGGTTGGAAGCTGTTTATGCCTCTTGCAGAGCCCTGTATCCAAGTCAACCTAACCCTTTGCAAGTAACTGCAGTTGTAAAGTTTTGGCTTGGAGGTCCAGATCCACTTGACTACATTAGTATGTACAGTAACCCTGGCGACCCGCAACGGAATATTCCATCCCACTGGCATTACATCAGTTTTGGGCTATCAGATCTCCACGGTGATGGCCGAGTGCATGAACCAATCAACGCTAACGATGGACCAAGTGGCTTTGGGTTTGAGTTGTCCTTCCGATTAAAGAAAGAATCAACAGAAACAGCACCCCCTACATGGCCAGCTGAATTAATGCAAGGTCTTGCAAGATATGTTTTCCAGTCAGAGAACACATTGTGTAGTGGGGACCATGTTCCATGGCATGCATCTCTGGACAACTCGGAGTCTAGAATACAACACATGCTGATGTGCGAGGACCCACAGTTACAGACGATTCAAACTCCTCATGGCTATCTCAACTTCATGCAGATAGTTGGGGTATGCTCTGAAGAACTCCAAGCAGCTCAAAGATGGAATGGACCAGGTGTCTTGGAACTTCTGCGATCCATTCCAGTTGCTGGTGGTTCCTGGCTTATCACTGATATGAGGAGAGGAGAGTCCATCTTTGATATAAATCCACAGTTGCAGGACGAAGTTGAGAATGGTATCGATAACGAAGGTTCCAACCTAAGTGGCGTGAGCGCAAAGTGCTCCTGGGAAGAACTTGATGACATGGGGGAGCCTTCAGAGCAGTCTTCTCCAAGAATAACAAAATTTGAATCTGAGCAGATAAGAAATGCTCTAATGATGGGGCTGGCCAGAGAGAAGACTCCTCTTCCATCCATATCCAGGAAAGATTCTGACAAGTCGTCCTCACTAGACGAGGAATTGGAGCATCGAAGGTCATCATTCCAAAGTGACGTAGAGTCGCAATCTAACATTTTAGAGCTTGGGAATCCCAGGGTAATAAACGCTGTGAAACTCAACATCAACCTAGAGGCCGGGTCTCTCTTACCACTTGCTCTAAGAGGACGGCTGAAACACGGAAGACATTTTACGTTTAAGGGTTTAAACGGGGACTGTGCAATTACTCTGGTATCTCCGAGAGTGGAAGGTGCTTTTGTGGATACTACTCATCCCTTTGGTGCCAGAGGTCCGTGGATGCAGATATTACTGACCGATGACTTTGTGGATGTGATGGCCATGGACTTGGATGACTTGAATAACCCAGAGTCTATGAAGGAATCTGTTAAATGTTTTGCGGGACTTCAGCCATGGAAAAGAACAATAGATGAATTAGTTTCAGTCAGGAAACCTACTAGAAGAGGAACAAAGGCTGGTAGTAAATTCAGGAGGCGCATTCCAGTGCTGAATGGAGATTTGAGATGGAATATCACAAACAACAATGAGGGTAAACAATCAGGGATTAACATCAACAACCTAATTCAGATTTCCTCAGGCTTTAAAGGGACATACCACAAGGAAATGCAGTATGAAATACAAACTGTGATTATGCCAAGGTTTTTGAATCATGCTAGAACTATCAAAACTCACCAAAACAGACATAATTTGCATGTTATTAGAAGGGACCATATGCCCGTTCTCCTGCATACCCATTCATTAAGAGTGTACTTACAAAATGTTCGCTCTATCAGTAATAAAGCAATATCTATATCTGACTTTGTTATCTCGAATGATATCGACATTTTGGCACTTACTGAAACATGGCTCGGAAGCACAACTGATAACTCAATGGTGAATAACCTTGTCCCCACAGGTTATGAATTTGAACATGTTCCCCGTTCCATCGGTAAAACTGGAGGAGGGGTCGGTGTGTTATTTAAATCCGGATTATCACTGAAGATTAAAACCTCGACTAGGGATAATCTATACACGCATTTTGAACACATGGATTGCTATGTTAGCAATAAAGATTTGCAATTTGCATTAAGTATCATATATCGACCCCCTCCCTCTTCCAAAAATGGTTTCAAAAACTCTATATTTTTTGATGAATGGGCGCTTTATCTTGAAAACATAACTGCTAAGACAGAACATGTAACCATTGTTGGCGACTTGAATTTCCACCTGGATGACCAACAAAATACTGATTCACAAAAGTTTTCAAGACTGTTAAATGTTCATGGTTTAAAGCAGCACGTCGTTGGTGCCACCCATCGTGCTGGCCATACCCTGGATGTAGTAATTACCAGGGAGCATACTGATCTACTCAATGGACCACCTTCCGTTGTTGACGCATGCCTTGGTGATATGAGTGGAAATTCGATTTGCGATCATTACGCCGTTAGATTTGACATCAACACGCGCAAGCCAGATCATATTCGCAAAGTAACAACATTCAGAAAGTTCAGTGATATCAATGTGCCTGATTTTATTGAGGACCTAAAAAAGTGTGAACCTCTAAAGAATGTCAACCGCCCGGTTGAGGAGCTTGTAGCCACGTACAATAACGAGTTGATCAAACTATTGGATCGCCATGCACCAGAATGCACCAAGACAATTACTTTGAGACCCAACACTCCATGGTATACAGATGCCCTTAGACAAGCAAAACATGAACGAAGGAAGGCTGAAAGGAATTGGAGGAAGACACGTCTTACTATCCACTGGCAAATCTTTAAGGATAAATGTAAAGTTGTGAATTCACTTTTAGCTCAAGAAAAGTGGAACTATTATTGCAACAAAATTGAGGAATGTGGAAGTGATCAAAGGCGTCTTTTTAGTTTAACCAAAGACTTGATGGGTGCACGGAATGATGCCAAATTGCCAGCGCATGCATGTACCAAAACTCTTGCTAATCAGTTTGGTGATTTCTTTATTAGCAAAGTAACAGCAATTCGTGATGAATTTGTGACATGTGTTTCCACGCCCATCGCTGATATATTGGCAGATGATAGCAACTTTGATGGCCACCCTCTAGCGTTCTTTTCTCCAGCCACTGAGGAAGAAGGAGAACTACCTAAGCATTTCCAGTGGCCAGACCATAATTTTTCATTGACATTGAAGGCAGATGACTAA

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03372	Exo_endo_phos	Endonuclease/Exonuclease/phosphatase family	Domain	Interproscan
PF05076	SUFU	Suppressor of fused protein (SUFU)	Family	Interproscan
PF12470	SUFU_C	Suppressor of Fused Gli/Ci N terminal binding domain	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR005135	Domain	Endonuclease/exonuclease/phosphatase	Interproscan
IPR007768	Family	Suppressor of fused	Interproscan
IPR020941	Domain	Suppressor of fused-like domain	Interproscan
IPR024314	Domain	Suppressor of fused C-terminal	Interproscan
IPR036691	Homologous_superfamily	Endonuclease/exonuclease/phosphatase superfamily	Interproscan
IPR037181	Homologous_superfamily	Suppressor of fused, N-terminal	Interproscan
IPR038489	Homologous_superfamily	Suppressor of fused, C-terminal domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10928	SUPPRESSOR OF FUSED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003824	Molecular Function	catalytic activity	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0008134	Molecular Function	transcription factor binding	Interproscan
GO:0042994	Biological Process	cytoplasmic sequestering of transcription factor	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-