Gene detail

Detailed information of Paelopatides02747 in Paelopatides sp. Yap Gene info

Gene ID	Annotation	Contig	Start	End	Strand
Paelopatides02747	EPIDERMAL GROWTH FACTOR RECEPTOR KINASE SUBSTRATE EPS8-RELATED PROTEIN	ctg1239	62259	103364	-

Gene Structure

More details in Jbrowse Sequence

CDS

Paelopatides02747

ATGAGCGAACTCCATATTGTAGCTAGAACTATGGGTTGCAAGATATTAGGGATTACCGAAACAATGTTTAATATAGATGTGTTTGACGCAGAAGTATCGGTACCGAATTTCAAACTGTTTAGAAGTGATAGATTAACGGGAAAAGGTGGTGGTTCGTGTTTATATGTGCATGACTCGTTACAATCGCATGAAATCGTAATAAATGTACCTGATTGTATTTGCGTAACTGTAACGCTCGAATCATTTAATATTGCAATATTTGTCGTGTACAGAGCTCCATCGCTACCGCTCAATAGCTGCAAATCAATGCTAGATAATATTTCTACCGTTATTGATAGCCTTGCCCTTGATACGGAATATATTGTCATGGGAGATTTCAATCTACCTGATGTTTCTTGGGATTCAGGTTCCGTTATATGTCCGAGCGATTCAACTAATAAAAAATATGTGATTCAGCGGTTATTTCTTGATTTCTTTGTTGGGCATGATCTCAGTTGGGTTATCGGGGATGACGTCAAAACTCGCCGACGCAAGGTTTTAACAGAGATACAGTCCGCCACTCTGGACAATGTTTTGACTTCAAATTACAACATGTTTCATGAGGTTCAAATTACATCACCTCTTGGGAAATCGGACCATGTGGGAATTATCAGCGAGTGGAAAATAACGAATAGGGAGGAATATATAACTCACGAGAAGAAGAATTGGACAAAAATGAAGCTGGAAGCTATCGCAAGCAAGGCTGAGTCTCTGTATTGGGTCGGAGACTCTCTCTCGGCAGAGGATCTCTGGAAACGGATTCATGACAATGCTAGAATTATAACTGAGTCCGTTCCCGTCAGTAAAATAAGAGTGAGCCGCTCAGGTTCAGTTAAAACTAAATCAGTTTGGGACAGACCTAGCCTGATTAAATCAAGGAAGGAGAAAGAGAAAGCGTGGGCTTCTTTTGAGAACAACCCAACATCAAGAAACCTGAATATCGTCATGGATAAACAGCACATTTTCGAGAATAAACAACGAAAGGCAATGATGCGGTACGAGAATGTGGCAGCCATGCAGTTGAAGAACAACCCGAAAGCATTTTATGGCTACATGAACTCAAAACGGAAGATACGAGCGGCAATATCCGGCCTGAAGAATATAAACGGAGAACTGCTTCATCCAGCAAAAGACACTGCCAACGAACTGGGGGCCTTCTTTGAGAGCACGTTTGTGAAAGAGGACCCTAATATTTTGGACAGTAGAAGGAAATGGTGGGAAGTGAGGAATTCCTCTGGACTGTCTGGTTTTGTTCCTTCCACTATCCTGGAGGTCTATCATCCCTCTTTAGGAAGCTCTGGACACAATCCTAACTTCAACCATTCAAACTCATCTTTTGACCATATACGCCAACCATCGCCCCCTCTCAGTGACCCTAGCAACCATTCCAGGGAAGTCGTAAGCCAAGCAGAAGTTCATGCTCCACCTCCAGAATTTGCTCCAGTCCCTCCCCCAGCCCCTCCCCCACCCCCTCCTCCTCCACCACCTCCTCCACCTGTTGCACCAACATTTACCAAGTTAAACATTCCAAAGAAGACGCATCCTTCAGCTCAAACGGCTTTCGGAAGCACGGATTTTCACTCTGAATTGACTAACACCGTCCGCAGGAAACAGCAGCAGCGTCAGCAGCAGGCTGTCGACGGGATATTCCACAGCGAACCACAGACTAGCAACAGATTGTCATCTAACACACCTGATATGGATGCCCTGAATGATGAGCTGTTAAAGAGGGTTAGCAAGGTGGGGACCAAGCGGAACTACAAAGTGGTCAAGCAGTCCGGTCCTCAGATACCACTTACATTTGACTCCCCTTCAGCAGAGGTCACCGATTGGCTCAACTCAAAGGGATTCAGCAAATTAACCGTGACAAGCCTAGGCGTCCTGTCTGGTGCGCAGCTGTTCAGCTTGACCAGAGATGAACTACAACAAGTCTGCCAGAACGATGGCGGACGTGTCTACAGCCAACTCATGGTTCAGAAGTCTAACATACAGGCACTGGAAGTGACCAGTACCTCTGCCGAACTCCAGGCCATAATGGACAGAAGAAAAGTCCGCAGCGTGACCGACGAGACCCTCGGTGCACCTCCAGACTTTGATCCCGGTCTGCCCATAGGAGGTACTTAA

Transcript

Paelopatides02747

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF14529	Exo_endo_phos_2	Endonuclease-reverse transcriptase	Domain	Interproscan
PF18016	SAM_3	SAM domain (Sterile alpha motif)	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR005135	Domain	Endonuclease/exonuclease/phosphatase	Interproscan
IPR013761	Homologous_superfamily	Sterile alpha motif/pointed domain superfamily	Interproscan
IPR036691	Homologous_superfamily	Endonuclease/exonuclease/phosphatase superfamily	Interproscan
IPR039801	Family	Epidermal growth factor receptor kinase substrate 8-like	Interproscan
IPR041418	Domain	SAM domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12287	EPIDERMAL GROWTH FACTOR RECEPTOR KINASE SUBSTRATE EPS8-RELATED PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003779	Molecular Function	actin binding	Interproscan
GO:0003824	Molecular Function	catalytic activity	Interproscan
GO:0005886	Cellular Component	plasma membrane	Interproscan
GO:0007266	Biological Process	Rho protein signal transduction	Interproscan
GO:0035023	Biological Process	regulation of Rho protein signal transduction	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-