Gene detail

Detailed information of Paelopatides00405 in Paelopatides sp. Yap Gene info

Gene ID	Annotation	Contig	Start	End	Strand
Paelopatides00405	PLEXIN	ctg10309	63480	74201	+

Gene Structure

More details in Jbrowse Sequence

CDS

Paelopatides00405

ATGACATTACTCTTAGTTAATGTTTGGAATGTTGCAGGACAGAGTTATCCTACTTTTCAAATTCCTTATTCCAGATCAGTTTTCCAAAATCAATTCCTTGATCATAGTAATGGTAATCTGTATATAGGAGGACTGAATTATATTTATAAATTAAACAGTGATTTAGACTTAATCCGATCGGAACAAACAGGTCCAGTTGATGACAACCCTGACTGTAGACCTCCTCCACAGGAGTGTCATTTTCCAAAGAGTAGTACGGATAATTACAATAAAGTGATTTTAGTTCACGAAGGTAGGCTCATCACATGCGGGAGTATTTATCAAGGAACTTGTCGTATCAGAGATATTGAATATATTAATATCACATATGGTGATTCTATACGAGAGGTGGTACCCAATACGCCACCTGGTTCTGCGGTTGGATTCATAGCTAATGGAGATAATGATCAGGTCCTTTATGTTGCATCATCGTATGCACACTGGTTAAGAGATGTACCAACAGTATCGACTAGATTAATATCACAGTCCACACCGGAAAATAAATTATTTAAAGTCTCATCTGAAAGTGCTGAAATAGAAATTCCCCCAATAGTCAGGGATGCCTCTCCTGCAGAGCAGCTGTTCAACATCAGTTATATTTATGGTTTCACCAGTGGTCAGTTCAGCTACTTTGCTGCATCACAACCAAGCGATTACACTACGACAAGTAGATACACTTCTAAATTAGTTCGTCTTTGTCACGGTGATCCAGACTTTAATTCCTACATTGAACTCCATATTGTCTGTGGAATAAATGATGGTGAAAGTGATTACAACTTGATCCAGTCTGCGTACCTTGCCTCTCTTTCTCTGGATGGAGGTGAATCAAAGGATATACTGGTGGCTGCATTCTCAAAGTCAGATTTATTGACCAGTCCCAATCCTTCAGCTGAATCAGCTATCTGTGTATATTCTGTAGATGATATCAATCAAGCATTCTATAACAGACGTTTAGATTGTGCTGAACAGGGGACGGACAACACAGAAATCAGATGGGCTGGATCTACGGCTTGCAATTCTAATTCATTTCTGTTCCAATCCATCAATGATAGTTCACCAACAGGTTACTGTCACACCACTGAAAACCAGGCTCCTCTCGGAGGTGACAACAGAGCTATCATCATATCAGCCACTCCAGTATATGAGAGCACTGATCACATCACTGCTGTTGCTGCTGTCCAACATTTTGAAACTTCAATTATCTTCTCTGGAGATAGCAGTGGCAATTTTAAAAAGGTAAAGAATCAAGGACAATTGTGTAGCCCAGAAGTCTACAAAAGTCTAAATCTCCACCAAACCTCAGTCATCAGGAATGGATTGCTGGTCTCGCAAGATAAAGAATTCATATTCATCACTTCAGAGGACCAGGTATGGCAGTATGGTGTAAAGTTCCGATGGAAGAATGTTCAGCAATACACAACATGTGAACAGTGTCACTCCGCACTGGACCCATTCTGTGGATGGTGCAGTTTGCAAAATGAGTGTACCCGAAGAATTGATTCATATTGTCAAGGCTCACAAAACGGTTCTTCGTCTAGATGGCTTTCAAAAGAGGACGACTGTTTGACTATTACTGCAGTGACACCAGAGTTTGCTCTTGCTGAGGCAATAACAGAGTTAACGATTGACGTCTCAAACCTGCCCTCCATCTCAAATAGTAGCCTGACTTGTGTATTTCTTGAAGGCACAATTATTCTTGGGTCACAGCCAGCAACAATCATGGAAGACATGTTGAGAGTCATGTGTAATACCCCTGTGAATATTAGGGCCACAAGCAAAGGTGAGCGATTTAAGACTGTAGAATTACAGCTACACTACGAAGAAAGTGGTCAGAGGCGAAACATTGTTGCAATACCATTTGACTTTTATGATTGCACAAAAATTTCATCCTGTTCTGAATGTGCTGGAAATAAATATGGCTGCCAGTGGTGTCTCCATAGCAACCAGTGCAATGATGGTACACAAGGCTGTGTCATGAGTGACATTATTACTAGTAGCAATGTCTGTCCACTGATTCATAGAGCAGATGAAGTGTTAATCCCTGCTGGACAAACTCAAGAGTTACAGTTTGACGGAGTTAATTTCCCAAACAATGTAAGTTCTACGTCTTTCCTCAAAATGCACAGTCATGAAGTGTACATGTTTGTGTTTTCCCCACAGTACAACTATTCTTCATCATCTGAATCTATCAGTGGTTCATTGGAAATATTGTGGGGAAATTTGCCTTTAGACATGGAAGACAATCTTATAGTAACCATTTACAAATGTAGCAGAATGGCTGTAACTATGCTGGATGGGGAGAGCAGACCAACTTGTGGGATTCACCTCGCCTGCCCACAGGACGAATGGCTTAGTCAAGACATGAACTGCCCGAATCCTACAATAATCAGTTTGTTCCCAACTTCAGGACATGTGGCAGGTGGAACTAGAATCACAATTCGCGGATACAACCTTGGTTTAAATGCTTCCGACATCAAGCTAATTTCAGTGGGCGATGCTTACTGTGCGTCTACGGAGTTTGTTTCGTCACAATTGTTGTATTGTACCACCGATCTAACTACCATTCGTCAGGGTAAGGTGATCGTTGAGTTTAATAGCAGTCGAACACTCCTAGCTGAGTCAGAGCAGGAATTTTCTTTCGTGAAACCAACTATTTTATCTTCATATCCTGTGAGAGGTCCTCGGTCAGGAGGTACCCGGCTGGTAGTGAGGGGTATACATTTAGATGCTGGTCTCAACCGTGCAGTAACAATTAGTTCTACTCCTTGCTATTCACGGTCTGGATATTCTTGTGATATATTCGAGGAATATTCGGATGAAATTATATGCAGGAATTCAGCCGGTAATGTTAATGTTACAGAGGGTCATGAAATTTCTGTGGACTTTGATCTCGGTTGTGAAACTGGTGGTGGAGGATTCACGTATCAAGAGGATCCTTTTGTACATGCCTTTGTGAAATTGAGGTCCTTTGCCAGTGGTGGACTGGACCTAAAGATATCAGGAGAATATTTTGACATCATCCAAGAGGCACGACTGGAATTTTTAATTGGTCCAAACACATTTACTGGGGAATGTTTTAACTCTTCTGGATCAAAGATGGAGCTTATTTGCAAGTCTCCTAACATTTATGATGCACAAACAGACTACCCCTTCTTATTGCCATCTCTAAACATTAGTCTGTACATGGACGGTGTGACACGTTACATTCATTTAGATTCATTTCCGGGTTCTCTTGATCCATTCTTCGTATTTGTCAAAGACCCTGTGTACTACCAGCTGCCAGGAGGTGAAGATATTATCAAAGTGCCATACGAAGGCCAAGGGCTGGACGATATCACAATACAGGGAGACGGCCTAACTCTTGCGTCAACTCGAAATGACGTGTCAGTTACGATTGGTGTTGAAACATGTCGCGTGGTAGATCTATCTCTCGAACATTTGATATGCCAATATCCAAGCCTACCCACAGGAACTCATCAAGTACAGGTAGAGCACGGTAACCTAATCATTAATGTTGGTTCGGTGGAGTACCTACGTCTTGACGACAGCCTTTCACTTCAGAGTGTGGCCATTATTATCCTGTCGTGTGTCCTTGTAGTGGTTTTCGGTTGTTTATGTATTTTCATAACCGTTGTGTTGTCGAAATGTTTACAAATAAACGGACGAATAGACAATCAGTTCTTCATAGTTATTATGACAATAATTCTCAAAAATATCAATGAAAACTAG

Transcript

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01403	Sema	Sema domain	Repeat	Interproscan
PF01437	PSI	Plexin repeat	Family	Interproscan
PF01833	TIG	IPT/TIG domain	Domain	Interproscan
PF17960	TIG_plexin	TIG domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001627	Domain	Sema domain	Interproscan
IPR002165	Repeat	Plexin repeat	Interproscan
IPR002909	Domain	IPT domain	Interproscan
IPR013783	Homologous_superfamily	Immunoglobulin-like fold	Interproscan
IPR014756	Homologous_superfamily	Immunoglobulin E-set	Interproscan
IPR015943	Homologous_superfamily	WD40/YVTN repeat-like-containing domain superfamily	Interproscan
IPR016201	Domain	PSI domain	Interproscan
IPR031148	Family	Plexin family	Interproscan
IPR036352	Homologous_superfamily	Sema domain superfamily	Interproscan
IPR041019	Domain	Plexin, TIG domain 1	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR22625	PLEXIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0002116	Cellular Component	semaphorin receptor complex	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0005887	Cellular Component	plasma membrane	Interproscan
GO:0007162	Biological Process	negative regulation of cell adhesion	Interproscan
GO:0008360	Biological Process	regulation of cell shape	Interproscan
GO:0017154	Molecular Function	semaphorin receptor activity	Interproscan
GO:0030334	Biological Process	regulation of cell migration	Interproscan
GO:0043087	Biological Process	regulation of GTPase activity	Interproscan
GO:0050772	Biological Process	positive regulation of axonogenesis	Interproscan
GO:0071526	Biological Process	semaphorin-plexin signaling pathway	Interproscan
GO:1902287	Biological Process	semaphorin-plexin signaling pathway involved in axon guidance	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-