Detailed information of Paelopatides00015 in Paelopatides sp. Yap Gene info
Gene IDAnnotationContigStartEndStrand
Paelopatides00015NUCLEAR FACTOR NF-KAPPA-B PROTEINctg1691981777513+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
Transcription Factors FamilyRHD

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00531DeathDeath domainDomainInterproscan
PF00554RHD_DNA_bindRel homology DNA-binding domainDomainInterproscan
PF12796Ank_2Ankyrin repeats (3 copies)RepeatInterproscan
PF16179RHD_dimerRel homology dimerisation domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000451FamilyNF-kappa-B/DorsalInterproscan
IPR000488DomainDeath domainInterproscan
IPR002110RepeatAnkyrin repeatInterproscan
IPR002909DomainIPT domainInterproscan
IPR008967Homologous_superfamilyp53-like transcription factor, DNA-binding domain superfamilyInterproscan
IPR011029Homologous_superfamilyDeath-like domain superfamilyInterproscan
IPR011539DomainRel homology domain, DNA-binding domainInterproscan
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR014756Homologous_superfamilyImmunoglobulin E-setInterproscan
IPR030492Conserved_siteRel homology domain, conserved siteInterproscan
IPR032397DomainRel homology dimerisation domainInterproscan
IPR033926DomainNFkappaB IPT domainInterproscan
IPR036770Homologous_superfamilyAnkyrin repeat-containing domain superfamilyInterproscan
IPR037059Homologous_superfamilyRel homology domain (RHD), DNA-binding domain superfamilyInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR24169NUCLEAR FACTOR NF-KAPPA-B PROTEINInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000978Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0003700Molecular FunctionDNA-binding transcription factor activityInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0007165Biological Processsignal transductionInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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