Detailed information of PMEG.utg000334l.86 in Placopecten magellanicus Gene info
Gene IDAnnotationChromosomeStartEndStrand
PMEG.utg000334l.86E3 UBIQUITIN-PROTEIN LIGASE UBR4chrom021965564019768494-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
Ubiquitin FamilyE3|E3 activity|UBR-box

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02207zf-UBRPutative zinc finger in N-recognin (UBR box)FamilyInterproscan
PF13764E3_UbLigase_R4E3 ubiquitin-protein ligase UBR4FamilyInterproscan
PF19423E3_UBR4_NE3 ubiquitin-protein ligase UBR4 N-terminalDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR003126DomainZinc finger, UBR-typeInterproscan
IPR016024Homologous_superfamilyArmadillo-type foldInterproscan
IPR025704DomainE3 ubiquitin ligase UBR4, C-terminalInterproscan
IPR036322Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan
IPR045189FamilyE3 ubiquitin ligase UBR4-likeInterproscan
IPR045841DomainE3 ubiquitin-protein ligase UBR4, N-terminalInterproscan
IPR047509DomainE3 ubiquitin-protein ligase UBR4-like, UBR-boxInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR21725E3 UBIQUITIN-PROTEIN LIGASE UBR4Interproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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