Detailed information of PMEG.utg000325l.16 in Placopecten magellanicus Gene info
Gene IDAnnotationChromosomeStartEndStrand
PMEG.utg000325l.16EXCISION REPAIR CROSS-COMPLEMENTING 1 ERCC1chrom095174812251755906-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00181Ribosomal_L2Ribosomal Proteins L2, RNA binding domainDomainInterproscan
PF03834Rad10Binding domain of DNA repair protein Ercc1 (rad10/Swi10)FamilyInterproscan
PF03947Ribosomal_L2_CRibosomal Proteins L2, C-terminal domainDomainInterproscan
PF14520HHH_5Helix-hairpin-helix domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR002171FamilyLarge ribosomal subunit protein uL2Interproscan
IPR004579FamilyERCC1/RAD10/SWI10 familyInterproscan
IPR008991Homologous_superfamilyTranslation protein SH3-like domain superfamilyInterproscan
IPR010994Homologous_superfamilyRuvA domain 2-likeInterproscan
IPR011335Homologous_superfamilyRestriction endonuclease type II-likeInterproscan
IPR012340Homologous_superfamilyNucleic acid-binding, OB-foldInterproscan
IPR014722Homologous_superfamilyLarge ribosomal subunit protein uL2, domain 2Interproscan
IPR022666DomainLarge ribosomal subunit protein uL2, RNA-binding domainInterproscan
IPR022669DomainLarge ribosomal subunit protein uL2, C-terminalInterproscan
IPR047260DomainERCC1-like, central domainInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR12749EXCISION REPAIR CROSS-COMPLEMENTING 1 ERCC1Interproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000110Cellular Componentnucleotide-excision repair factor 1 complexInterproscan
GO:0003684Molecular Functiondamaged DNA bindingInterproscan
GO:0003697Molecular Functionsingle-stranded DNA bindingInterproscan
GO:0003735Molecular Functionstructural constituent of ribosomeInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005840Cellular ComponentribosomeInterproscan
GO:0006281Biological ProcessDNA repairInterproscan
GO:0006312Biological Processmitotic recombinationInterproscan
GO:0006412Biological ProcesstranslationInterproscan
GO:0070522Cellular ComponentERCC4-ERCC1 complexInterproscan
GO:0070914Biological ProcessUV-damage excision repairInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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