Detailed information of PMEG.utg000304l.77 in Placopecten magellanicus Gene info
Gene IDAnnotationChromosomeStartEndStrand
PMEG.utg000304l.77RIBONUCLEASES P/MRP PROTEIN SUBUNIT POP1chrom041778098517811557-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00175NAD_binding_1Oxidoreductase NAD-binding domain DomainInterproscan
PF00970FAD_binding_6Oxidoreductase FAD-binding domainDomainInterproscan
PF06978POP1_NRibonucleases P/MRP protein subunit POP1, N-terminalDomainInterproscan
PF08170POPLDPOPLD (NUC188) domainDomainInterproscan
PF09791Oxidored-likeOxidoreductase-like protein, N-terminalFamilyInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR001433DomainOxidoreductase FAD/NAD(P)-bindingInterproscan
IPR001709DomainFlavoprotein pyridine nucleotide cytochrome reductaseInterproscan
IPR008333DomainFlavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domainInterproscan
IPR009723DomainPop1, N-terminalInterproscan
IPR012590DomainPOPLD domainInterproscan
IPR017927DomainFAD-binding domain, ferredoxin reductase-typeInterproscan
IPR017938Homologous_superfamilyRiboflavin synthase-like beta-barrelInterproscan
IPR019180DomainOxidoreductase-like, N-terminalInterproscan
IPR039182FamilyRibonucleases P/MRP protein subunit Pop1Interproscan
IPR039261Homologous_superfamilyFerredoxin-NADP reductase (FNR), nucleotide-binding domainInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR22731RIBONUCLEASES P/MRP PROTEIN SUBUNIT POP1Interproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000172Cellular Componentribonuclease MRP complexInterproscan
GO:0001682Biological ProcesstRNA 5'-leader removalInterproscan
GO:0005655Cellular Componentnucleolar ribonuclease P complexInterproscan
GO:0008033Biological ProcesstRNA processingInterproscan
GO:0016491Molecular Functionoxidoreductase activityInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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