Detailed information of PMEG.utg000242l.19 in Placopecten magellanicus Gene info
Gene IDAnnotationChromosomeStartEndStrand
PMEG.utg000242l.19SMG-7 SUPPRESSOR WITH MORPHOLOGICAL EFFECT ON GENITALIA PROTEIN 7chrom101895620818997482-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00056Ldh_1_Nlactate/malate dehydrogenase, NAD binding domainDomainInterproscan
PF02866Ldh_1_Clactate/malate dehydrogenase, alpha/beta C-terminal domainDomainInterproscan
PF10373EST1_DNA_bindEst1 DNA/RNA binding domainRepeatInterproscan
PF10374EST1Telomerase activating protein Est1RepeatInterproscan
PF13638PIN_4PIN domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR001236DomainLactate/malate dehydrogenase, N-terminalInterproscan
IPR001252Active_siteMalate dehydrogenase, active siteInterproscan
IPR002716DomainPIN domainInterproscan
IPR010097FamilyMalate dehydrogenase, type 1Interproscan
IPR011990Homologous_superfamilyTetratricopeptide-like helical domain superfamilyInterproscan
IPR015955Homologous_superfamilyLactate dehydrogenase/glycoside hydrolase, family 4, C-terminalInterproscan
IPR018834DomainDNA/RNA-binding domain, Est1-typeInterproscan
IPR019458DomainTelomerase activating protein Est1-like, N-terminalInterproscan
IPR022383DomainLactate/malate dehydrogenase, C-terminalInterproscan
IPR029060Homologous_superfamilyPIN-like domain superfamilyInterproscan
IPR036291Homologous_superfamilyNAD(P)-binding domain superfamilyInterproscan
IPR045153FamilyEst1/Ebs1-likeInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR15696SMG-7 SUPPRESSOR WITH MORPHOLOGICAL EFFECT ON GENITALIA PROTEIN 7Interproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000184Biological Processnuclear-transcribed mRNA catabolic process, nonsense-mediated decayInterproscan
GO:0003824Molecular Functioncatalytic activityInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005697Cellular Componenttelomerase holoenzyme complexInterproscan
GO:0006099Biological Processtricarboxylic acid cycleInterproscan
GO:0006108Biological Processmalate metabolic processInterproscan
GO:0016491Molecular Functionoxidoreductase activityInterproscan
GO:0016615Molecular Functionmalate dehydrogenase activityInterproscan
GO:0016616Molecular Functionoxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptorInterproscan
GO:0030060Molecular FunctionL-malate dehydrogenase (NAD+) activityInterproscan
GO:0042162Molecular Functiontelomeric DNA bindingInterproscan
GO:0070034Molecular Functiontelomerase RNA bindingInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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