Detailed information of PMEG.utg000208l.177 in Placopecten magellanicus Gene info
Gene IDAnnotationChromosomeStartEndStrand
PMEG.utg000208l.177RBP-RELATEDchrom034542665445456367+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
Transcription Factors FamilyARID

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01388ARIDARID/BRIGHT DNA binding domainDomainInterproscan
PF08169RBB1NTRBB1NT (NUC162) domainDomainInterproscan
PF11717Tudor-knotRNA binding activity-knot of a chromodomain FamilyInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000953DomainChromo/chromo shadow domainInterproscan
IPR001606DomainARID DNA-binding domainInterproscan
IPR002999DomainTudor domainInterproscan
IPR012603DomainARID4A/B, PWWP domainInterproscan
IPR016197Homologous_superfamilyChromo-like domain superfamilyInterproscan
IPR025995DomainRNA binding activity-knot of a chromodomainInterproscan
IPR036431Homologous_superfamilyARID DNA-binding domain superfamilyInterproscan
IPR051232FamilyAT-rich Interactive Domain/SWI1 Chromatin RemodelingInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR13964RBP-RELATEDInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000976Molecular Functiontranscription cis-regulatory region bindingInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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