Detailed information of PMEG.utg000169l.150 in Placopecten magellanicus Gene info
Gene IDAnnotationChromosomeStartEndStrand
PMEG.utg000169l.150UBIQUITIN LIGASE E3 ALPHA-RELATEDchrom035980571159871960-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
Ubiquitin FamilyE3|E3 activity|N-domain
Ubiquitin FamilyE3|E3 activity RING|RING
Ubiquitin FamilyE3|E3 activity|UBR-box

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02207zf-UBRPutative zinc finger in N-recognin (UBR box)FamilyInterproscan
PF02617ClpSATP-dependent Clp protease adaptor protein ClpSFamilyInterproscan
PF18995PRT6_CProteolysis_6 C-terminalDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR003126DomainZinc finger, UBR-typeInterproscan
IPR003769DomainAdaptor protein ClpS, coreInterproscan
IPR014719Homologous_superfamilyRibosomal protein bL12, C-terminal/adaptor protein ClpS-likeInterproscan
IPR036390Homologous_superfamilyWinged helix DNA-binding domain superfamilyInterproscan
IPR039164FamilyE3 ubiquitin-protein ligase UBR1-likeInterproscan
IPR042065Homologous_superfamilyE3 ubiquitin-protein ligase ELL-likeInterproscan
IPR044046DomainE3 ubiquitin-protein ligase UBR-like, C-terminalInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR21497UBIQUITIN LIGASE E3 ALPHA-RELATEDInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0030163Biological Processprotein catabolic processInterproscan
GO:0061630Molecular Functionubiquitin protein ligase activityInterproscan
GO:0071596Biological Processubiquitin-dependent protein catabolic process via the N-end rule pathwayInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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