Detailed information of PMEG.utg000167l.57 in Placopecten magellanicus Gene info
Gene IDAnnotationChromosomeStartEndStrand
PMEG.utg000167l.57PROLYL 4-HYDROXYLASE ALPHA SUBUNITchrom017796411778002516-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00008EGFEGF-like domainDomainInterproscan
PF00090TSP_1Thrombospondin type 1 domainDomainInterproscan
PF07699Ephrin_rec_likeTyrosine-protein kinase ephrin type A/B receptor-like DomainInterproscan
PF08336P4Ha_NProlyl 4-Hydroxylase alpha-subunit, N-terminal regionFamilyInterproscan
PF13385Laminin_G_3Concanavalin A-like lectin/glucanases superfamilyDomainInterproscan
PF136402OG-FeII_Oxy_32OG-Fe(II) oxygenase superfamilyDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000152PTMEGF-type aspartate/asparagine hydroxylation siteInterproscan
IPR000742DomainEGF-like domainInterproscan
IPR000884RepeatThrombospondin type-1 (TSP1) repeatInterproscan
IPR001881DomainEGF-like calcium-binding domainInterproscan
IPR005123DomainOxoglutarate/iron-dependent dioxygenaseInterproscan
IPR006620DomainProlyl 4-hydroxylase, alpha subunitInterproscan
IPR009030Homologous_superfamilyGrowth factor receptor cysteine-rich domain superfamilyInterproscan
IPR011641DomainTyrosine-protein kinase ephrin type A/B receptor-likeInterproscan
IPR011990Homologous_superfamilyTetratricopeptide-like helical domain superfamilyInterproscan
IPR013320Homologous_superfamilyConcanavalin A-like lectin/glucanase domain superfamilyInterproscan
IPR013547DomainProlyl 4-hydroxylase alpha-subunit, N-terminalInterproscan
IPR036383Homologous_superfamilyThrombospondin type-1 (TSP1) repeat superfamilyInterproscan
IPR044862DomainProlyl 4-hydroxylase alpha subunit, Fe(2+) 2OG dioxygenase domainInterproscan
IPR045054FamilyProlyl 4-hydroxylaseInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR10869PROLYL 4-HYDROXYLASE ALPHA SUBUNITInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0004656Molecular Functionprocollagen-proline 4-dioxygenase activityInterproscan
GO:0005506Molecular Functioniron ion bindingInterproscan
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005783Cellular Componentendoplasmic reticulumInterproscan
GO:0016705Molecular Functionoxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygenInterproscan
GO:0018401Biological Processpeptidyl-proline hydroxylation to 4-hydroxy-L-prolineInterproscan
GO:0031418Molecular FunctionL-ascorbic acid bindingInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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