Detailed information of PMEG.utg000162l.39 in Placopecten magellanicus Gene info
Gene IDAnnotationChromosomeStartEndStrand
PMEG.utg000162l.39RIBONUCLEASEchrom045273687852826292-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00773RNBRNB domainDomainInterproscan
PF08016PKD_channelPolycystin cation channelFamilyInterproscan
PF17216Rrp44_CSD1Rrp44-like cold shock domainDomainInterproscan
PF17849OB_Dis3Dis3-like cold-shock domain 2 (CSD2)DomainInterproscan
PF21381MCLN_ECDMucolipin, extracytosolic domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR001900DomainRibonuclease II/RInterproscan
IPR012340Homologous_superfamilyNucleic acid-binding, OB-foldInterproscan
IPR013122DomainPolycystin cation channel, PKD1/PKD2Interproscan
IPR022966Conserved_siteRibonuclease II/R, conserved siteInterproscan
IPR033771DomainRrp44-like cold shock domainInterproscan
IPR041505DomainDis3-like cold-shock domain 2Interproscan
IPR049134DomainMucolipin, extracytosolic domainInterproscan
IPR050180FamilyRNR RibonucleaseInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR23355RIBONUCLEASEInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000175Molecular Function3'-5'-RNA exonuclease activityInterproscan
GO:0000177Cellular Componentcytoplasmic exosome (RNase complex)Interproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0004540Molecular FunctionRNA nuclease activityInterproscan
GO:0016075Biological ProcessrRNA catabolic processInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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TOP