Detailed information of PMEG.utg000025l.60 in Placopecten magellanicus Gene info
Gene IDAnnotationChromosomeStartEndStrand
PMEG.utg000025l.60-chrom176018375960273714-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
--

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02820MBTmbt repeatDomainInterproscan
PF08477RocRas of Complex, Roc, domain of DAPkinaseDomainInterproscan
PF13676TIR_2TIR domainDomainInterproscan
PF13855LRR_8Leucine rich repeatRepeatInterproscan
PF16095CORC-terminal of Roc, COR, domainFamilyInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000157DomainToll/interleukin-1 receptor homology (TIR) domainInterproscan
IPR001611RepeatLeucine-rich repeatInterproscan
IPR002048DomainEF-hand domainInterproscan
IPR003591RepeatLeucine-rich repeat, typical subtypeInterproscan
IPR004092RepeatMbt repeatInterproscan
IPR018247Binding_siteEF-Hand 1, calcium-binding siteInterproscan
IPR020859DomainRoc domainInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR032171DomainC-terminal of Roc (COR) domainInterproscan
IPR032675Homologous_superfamilyLeucine-rich repeat domain superfamilyInterproscan
IPR035897Homologous_superfamilyToll/interleukin-1 receptor homology (TIR) domain superfamilyInterproscan
IPR036388Homologous_superfamilyWinged helix-like DNA-binding domain superfamilyInterproscan
IPR050216FamilyLeucine-rich repeat domain-containing proteinInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR48051-Interproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0007165Biological Processsignal transductionInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
------

TOP