Detailed information of PMEG.utg000003l.10 in Placopecten magellanicus Gene info
Gene IDAnnotationChromosomeStartEndStrand
PMEG.utg000003l.10RING ZINC FINGERchrom1024553452474497+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
Ubiquitin FamilyE3|E3 activity RING|RING

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13639zf-RING_2Ring finger domainDomainInterproscan
PF18212ZNRF_3_ectoZNRF-3 EctodomainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR001841DomainZinc finger, RING-typeInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR040700DomainZNRF-3, ectodomainInterproscan
IPR051073FamilyZNRF3/Arkadia E3 ubiquitin-protein ligasesInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR16200RING ZINC FINGERInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0006511Biological Processubiquitin-dependent protein catabolic processInterproscan
GO:0030511Biological Processpositive regulation of transforming growth factor beta receptor signaling pathwayInterproscan
GO:0030579Biological Processobsolete ubiquitin-dependent SMAD protein catabolic processInterproscan
GO:0032184Molecular FunctionSUMO polymer bindingInterproscan
GO:0045893Biological Processpositive regulation of DNA-templated transcriptionInterproscan
GO:0046332Molecular FunctionSMAD bindingInterproscan
GO:0061630Molecular Functionubiquitin protein ligase activityInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
------

TOP