Detailed information of PMEG.utg000001l.19 in Placopecten magellanicus Gene info
Gene IDAnnotationChromosomeStartEndStrand
PMEG.utg000001l.19U3 SMALL NUCLEOLAR RNA INTERACTING PROTEIN 2chrom095869175758709584+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
Ubiquitin FamilyUBD|Other|Beta-prp
Ubiquitin FamilyE3|E3 adaptor Cullin RING|CDC20
Ubiquitin FamilyE3|E3 adaptor Cullin RING|DWD

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00135COesteraseCarboxylesterase familyDomainInterproscan
PF00400WD40WD domain, G-beta repeatRepeatInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000997FamilyCholinesteraseInterproscan
IPR001680RepeatWD40 repeatInterproscan
IPR002018DomainCarboxylesterase, type BInterproscan
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR019775Conserved_siteWD40 repeat, conserved siteInterproscan
IPR019819Conserved_siteCarboxylesterase type B, conserved siteInterproscan
IPR019826Active_siteCarboxylesterase type B, active siteInterproscan
IPR029058Homologous_superfamilyAlpha/Beta hydrolase foldInterproscan
IPR036322Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan
IPR039241FamilyRibosomal RNA-processing protein Rrp9-likeInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR19865U3 SMALL NUCLEOLAR RNA INTERACTING PROTEIN 2Interproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0004104Molecular Functioncholinesterase activityInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0030515Molecular FunctionsnoRNA bindingInterproscan
GO:0032040Cellular Componentsmall-subunit processomeInterproscan
GO:0034511Molecular FunctionU3 snoRNA bindingInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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