Gene ID | Annotation | Chromosome | Start | End | Strand |
---|---|---|---|---|---|
PE_Scaf9907_1.3 | RNA-BINDING PROTEIN RELATED | Superscaffold5 | 46720681 | 46741643 | - |
CDS | |||||
PE_Scaf9907_1.3 | |||||
Transcript |
PE_Scaf9907_1.3 |
Protein |
PE_Scaf9907_1.3 |
Gene family | Subfamily |
---|---|
- | - |
Pfam accession | Pfam name | Description | Type | Source |
---|---|---|---|---|
PF00013 | KH_1 | KH domain | Domain | Interproscan |
PF16275 | SF1-HH | Splicing factor 1 helix-hairpin domain | Domain | Interproscan |
InterPro term | Type | Description | Source |
---|---|---|---|
IPR001878 | Domain | Zinc finger, CCHC-type | Interproscan |
IPR004087 | Domain | K Homology domain | Interproscan |
IPR004088 | Domain | K Homology domain, type 1 | Interproscan |
IPR032570 | Domain | Splicing factor 1, helix-hairpin domain | Interproscan |
IPR036612 | Homologous_superfamily | K Homology domain, type 1 superfamily | Interproscan |
IPR045071 | Family | KH domain-containing BBP-like | Interproscan |
IPR047086 | Homologous_superfamily | Splicing factor 1, helix-hairpin domain superfamily | Interproscan |
PANTHER term | Description | Source |
---|---|---|
PTHR11208 | RNA-BINDING PROTEIN RELATED | Interproscan |
GO terms | Category | Description | Source |
---|---|---|---|
GO:0003676 | Molecular Function | nucleic acid binding | Interproscan |
GO:0003723 | Molecular Function | RNA binding | Interproscan |
GO:0003729 | Molecular Function | mRNA binding | Interproscan |
GO:0005634 | Cellular Component | nucleus | Interproscan |
GO:0008270 | Molecular Function | zinc ion binding | Interproscan |
GO:0048024 | Biological Process | regulation of mRNA splicing, via spliceosome | Interproscan |
KO | Enzyme | Enzyme ID | pathway | mapID | Source |
---|---|---|---|---|---|
- | - | - | - | - | - |
1. Expression trend for PE_Scaf9907_1.3 global RNA-seq network |