| Gene ID | Annotation | Chromosome | Start | End | Strand |
|---|---|---|---|---|---|
| PE_Scaf9907_1.3 | RNA-BINDING PROTEIN RELATED | Superscaffold5 | 46720681 | 46741643 | - |
| CDS | |||||
| PE_Scaf9907_1.3 | |||||
| Transcript |
| PE_Scaf9907_1.3 |
| Protein |
| PE_Scaf9907_1.3 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00013 | KH_1 | KH domain | Domain | Interproscan |
| PF16275 | SF1-HH | Splicing factor 1 helix-hairpin domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR001878 | Domain | Zinc finger, CCHC-type | Interproscan |
| IPR004087 | Domain | K Homology domain | Interproscan |
| IPR004088 | Domain | K Homology domain, type 1 | Interproscan |
| IPR032570 | Domain | Splicing factor 1, helix-hairpin domain | Interproscan |
| IPR036612 | Homologous_superfamily | K Homology domain, type 1 superfamily | Interproscan |
| IPR045071 | Family | KH domain-containing BBP-like | Interproscan |
| IPR047086 | Homologous_superfamily | Splicing factor 1, helix-hairpin domain superfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR11208 | RNA-BINDING PROTEIN RELATED | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0003676 | Molecular Function | nucleic acid binding | Interproscan |
| GO:0003723 | Molecular Function | RNA binding | Interproscan |
| GO:0003729 | Molecular Function | mRNA binding | Interproscan |
| GO:0005634 | Cellular Component | nucleus | Interproscan |
| GO:0008270 | Molecular Function | zinc ion binding | Interproscan |
| GO:0048024 | Biological Process | regulation of mRNA splicing, via spliceosome | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
| 1. Expression trend for PE_Scaf9907_1.3 global RNA-seq network |