Gene detail

Detailed information of PE_Scaf986_4.17 in Paraescarpia echinospica Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
PE_Scaf986_4.17	ACYL-COA-BINDING PROTEIN, ACBP	Superscaffold10	11120970	11123740	-

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

PE_Scaf986_4.17

TTTATGTCCAATACACACTGTTCTTCTACTAAAGCTACTTTGCGTCCTGTGGTTCTAGGGTTTACTCAATTAGACGCGAATATTAACGAGTGGACACACGAAGCTCGTAGTTAACACCTAGAACCCCTTTAGAAACATCTGAATGCGGCATTTGTGCACACCTGGGGTGTGGTCAGTCCACCACGTGACAAGGCTCTATATAAGGCCACGATCACGTAGTTTTGTTCGTTGCACCCCGACAAGCTCGAGTTTTATCAGGTAGACGTTCATTCAAGAATCCTACGGCAGACACCATGGTCATGCTTTACGAGAGCGAGGTAAGGCACTTCATCATTTGGACAGTGTAGACGGAATACTTGACTGGGTTTCGCCATACACTATTTTTACAGACAGGGTAATTAGTTTATATTTCAAAATGTTTAAAGTGGCAGACATTTTCTTGGTTAAGTTACCATTTGTTTCTCCTTAAGATACGGTCCTGTTAAAACAACACGGGAATCAATTCCCGCAAATTTATCTGCTCTCATTTGATAAATATCTTGCAAGTCTGTCATACACAGCCACCCTCGAGAGTCTGTCTCTTCAATGAAATAATGGTAAATACGTCGTGGACGTGAAACAGCTTGTTTAGCCAAACTTCGAATGTGTGCAACAAATATTGCAGAAACAGGCTTGGGACGTTTACGAGTTAGCAATGCTTTATAGGAACACCAGATATGTCTTTACAACAAATTAATCGCTGACAAATGTGTGAATTGATGATTTGACATTTACCCCGTTTCCGGCGGTTATATTACGCTCACTGTGTTTCGTTTTGAAGGACTTCAAAACGGCCGCCGAGAATGTGCGAAAGTTGTCGGAGACGCCACCGAACGAGGTATTCGCCAAACTGTACAGTCTCTTCAAGCAGGCGACCGTGGGAGACTGCGAGCGGGGTGAGAGACGCCCTACATCCTTACCTTACCTTATCTTAACCCACACCTTACCTATCCCCTTCGGCCCGCGAGGCTTCAGTACTCCGTTTCCAGTCTGCCATCTCTCCTGTTACTGCTCTTCCAATATCGCAAGACATGTCCACTTGTCCAGTAATTTCTTACATTTAGACTATTGCATTGTATTGCATCTTTTATACCAAGTACTTCGCATTTGTTTAACCATATGTACAGGTTTCCTACATTATGCATCTTAAGTGTTGGACGGCTACTAAATGCAAAATCATTTCAGTGGTACTTAAAAGCGATAACGTTTGATGACTATGACTAATATTATGAAGCTGTATCAGTGTGCGCGTGTTCACTGGTCATTGAACACAATACATGTTGACGCACAATTATGACGAATGTTCCAAAGAACACTTGCGTTGTTTTGCACATCTTAAATCGCTTTTGAGCAAAAGTGAGACTTATAAGCGACTTTTTTAAATAAAAAGTTAACCATTGAATGTTTTGATGTTGCCTTTATTTAATATTTAGTCATGTGAAGGTATTAAAATAACATTGCAAATGCAAAGAGCTATAGGGCTTACATATAGATCTATTTAAATTGTGACTTATTTCCTGCGACTTATTTCCTACATGGATGGTCGACGGTGCACGTGGCTCGTTGACGGTGCACGTGGCTCGTTGACGGTGCACGTGGCTCGTTGACGGTGCACTTGGCTCGTTGACGGTTTATTTTGGCATATTTTTATTGGCATGTCAGTAACGCATTAATTTCACGAATGTAGGCTAGTAAGTAGCATCATGTATTTTACCTTAACGGTTAACCCTTGTGTGCATTTCAGACAAGCCTAACGTTACCGAACTGAAGGAGAAGACGAAGTATGAAGCATGGATGTCCAACAAGGGTATGTTCCTATGTTCTGTCTCGCGTATCGGACTATTGGAACAATGTTGTAGGCGTCGGAATGTGTTTGATATGCATGGGATGGTGGCAAATTGGAGGGTGGCGCATACATTGAGGGGGAGCAAACAATGAGTGAGCAAACTATTGAGTCGAAACTATTGGCATATTTAGGGGCACCAATGGAATTTATTTGTTGTCCTACGCCATTAAAACAATACACAAAATGCATTCAACACGATACGTTTGTATATTTAGAACCCTGGCATTACGTATGCACTATCATTGTTTGATCGACGCATGTAAGCAGTTTGTCATCGCATTCTGGAAAGGAAAGAGTTAAAAAGGCAATCATTGGGCATATATCTCGTAAATATTACCTGTATTAAATAAACAACTCTGGCATGTATTGTTGATAGGAATGGATCGTGAAGAAGCGGCAAAATTATACATTGAAGAGGCGAAACAGGCGGTCGAAAAGTTCGGCTTGAAAAGCTGAAGCGTCATAGCTTCGTTCGAAATTAACGACGACGCTAGTGAGACGCGCATCCAGAGTGATATTGTTACGTTTTGTAATGTTAACGCATTGTTACTGTGTAATAATATTAATACAAATATTGACAGCATTACAAATGTAGTTCTGCTCGACTGTTTTGGACGTTCGTATTTCCGTTTCTATGCTGCACCGGTGTCGCCCTCCCGTGCACCAATTAACTGAAGGAAACTGCTATACGGAACAATAGTTAACTATCGACAGGTTCCACATAACCAGAGTCCATATAAATTTACAATTTGTAATTGCCTACCTTGTGCCCTTGATTCACTTAGGCCTACTGCAGGCCCATATTTGCAGAAATCCACATGCTGTCTTGATCAACTGAAACTGTTTATCATCGGGCTACGCGCGCACGCACGCACGCACGCACGCA

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00887	ACBP	Acyl CoA binding protein	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000582	Domain	Acyl-CoA-binding protein, ACBP	Interproscan
IPR014352	Homologous_superfamily	FERM/acyl-CoA-binding protein superfamily	Interproscan
IPR035984	Homologous_superfamily	Acyl-CoA binding protein superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23310	ACYL-COA-BINDING PROTEIN, ACBP	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000062	Molecular Function	fatty-acyl-CoA binding	Interproscan
GO:0006631	Biological Process	fatty acid metabolic process	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-

Expression pattern

1. Expression trend for PE_Scaf986_4.17 global RNA-seq network