Detailed information of PE_Scaf9646_4.4 in Paraescarpia echinospica Gene info
Gene IDAnnotationChromosomeStartEndStrand
PE_Scaf9646_4.4NUCLEAR RNA EXPORT FACTORSuperscaffold86026477260308002+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF03943TAP_CTAP C-terminal domainDomainInterproscan
PF09162Tap-RNA_bindTap, RNA-bindingDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR001611RepeatLeucine-rich repeatInterproscan
IPR005637DomainTAP C-terminal (TAP-C) domainInterproscan
IPR009060Homologous_superfamilyUBA-like superfamilyInterproscan
IPR012677Homologous_superfamilyNucleotide-binding alpha-beta plait domain superfamilyInterproscan
IPR015245DomainNuclear RNA export factor Tap, RNA-binding domainInterproscan
IPR018222DomainNuclear transport factor 2, eukaryoteInterproscan
IPR030217FamilyNuclear RNA export factorInterproscan
IPR032675Homologous_superfamilyLeucine-rich repeat domain superfamilyInterproscan
IPR032710Homologous_superfamilyNTF2-like domain superfamilyInterproscan
IPR035979Homologous_superfamilyRNA-binding domain superfamilyInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR10662NUCLEAR RNA EXPORT FACTORInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0006406Biological ProcessmRNA export from nucleusInterproscan
GO:0016973Biological Processpoly(A)+ mRNA export from nucleusInterproscan
GO:0051028Biological ProcessmRNA transportInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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Expression pattern
 1. Expression trend for PE_Scaf9646_4.4 global RNA-seq network
TOP