Detailed information of PE_Scaf9555_0.6 in Paraescarpia echinospica Gene info
Gene IDAnnotationChromosomeStartEndStrand
PE_Scaf9555_0.6PRE-MRNA CLEAVAGE COMPLEX IISuperscaffold135408891654116431-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF04818CIDCID domainRepeatInterproscan
PF20845Pcf11_helicalPre-mRNA cleavage complex 2 protein Pcf11, alpha-helical domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR002014DomainVHS domainInterproscan
IPR006569DomainCID domainInterproscan
IPR008942Homologous_superfamilyENTH/VHSInterproscan
IPR045154FamilyProtein PCF11-likeInterproscan
IPR047415DomainPcf11, CID domainInterproscan
IPR048830DomainPre-mRNA cleavage complex 2 protein Pcf11, helical domainInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR15921PRE-MRNA CLEAVAGE COMPLEX IIInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000993Molecular FunctionRNA polymerase II complex bindingInterproscan
GO:0003729Molecular FunctionmRNA bindingInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0005849Cellular ComponentmRNA cleavage factor complexInterproscan
GO:0006369Biological Processtermination of RNA polymerase II transcriptionInterproscan
GO:0006378Biological Processobsolete mRNA polyadenylationInterproscan
GO:0031124Biological ProcessmRNA 3'-end processingInterproscan
GO:0035091Molecular Functionphosphatidylinositol bindingInterproscan
GO:0043130Molecular Functionubiquitin bindingInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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Expression pattern
 1. Expression trend for PE_Scaf9555_0.6 global RNA-seq network
TOP