Detailed information of PE_Scaf9490_0.2 in Paraescarpia echinospica Gene info
Gene IDAnnotationChromosomeStartEndStrand
PE_Scaf9490_0.2ZINC FINGER MYND DOMAIN-CONTAININGSuperscaffold62748578927500350+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00439BromodomainBromodomainDomainInterproscan
PF21524SAMD1_WHSAM domain-containing protein 1, WH domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000313DomainPWWP domainInterproscan
IPR001487DomainBromodomainInterproscan
IPR011011Homologous_superfamilyZinc finger, FYVE/PHD-typeInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR019786Conserved_siteZinc finger, PHD-type, conserved siteInterproscan
IPR036427Homologous_superfamilyBromodomain-like superfamilyInterproscan
IPR047268DomainZinc finger MYND domain-containing protein 11, PWWP domainInterproscan
IPR047269FamilyZinc finger MYND domain-containing protein 11Interproscan
IPR048589DomainSAM domain-containing protein 1-like, WH domainInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR46379ZINC FINGER MYND DOMAIN-CONTAININGInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0003714Molecular Functiontranscription corepressor activityInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0009966Biological Processregulation of signal transductionInterproscan
GO:0034243Biological Processregulation of transcription elongation by RNA polymerase IIInterproscan
GO:0035064Molecular Functionmethylated histone bindingInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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Expression pattern
 1. Expression trend for PE_Scaf9490_0.2 global RNA-seq network
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