Detailed information of PE_Scaf9484_0.13 in Paraescarpia echinospica Gene info
Gene IDAnnotationChromosomeStartEndStrand
PE_Scaf9484_0.13CLASS II AMINOTRANSFERASE/8-AMINO-7-OXONONANOATE SYNTHASESuperscaffold22549198025502950+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00155Aminotran_1_2Aminotransferase class I and IIDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR004839DomainAminotransferase, class I/classIIInterproscan
IPR015421Homologous_superfamilyPyridoxal phosphate-dependent transferase, major domainInterproscan
IPR015422Homologous_superfamilyPyridoxal phosphate-dependent transferase, small domainInterproscan
IPR015424Homologous_superfamilyPyridoxal phosphate-dependent transferaseInterproscan
IPR050087Family8-amino-7-oxononanoate synthase class-IIInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR13693CLASS II AMINOTRANSFERASE/8-AMINO-7-OXONONANOATE SYNTHASEInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0004758Molecular Functionserine C-palmitoyltransferase activityInterproscan
GO:0005783Cellular Componentendoplasmic reticulumInterproscan
GO:0009058Biological Processbiosynthetic processInterproscan
GO:0030170Molecular Functionpyridoxal phosphate bindingInterproscan
GO:0046512Biological Processsphingosine biosynthetic processInterproscan
GO:0046513Biological Processceramide biosynthetic processInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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Expression pattern
 1. Expression trend for PE_Scaf9484_0.13 global RNA-seq network
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