Gene detail

Detailed information of PE_Scaf9210_0.8 in Paraescarpia echinospica Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
PE_Scaf9210_0.8	SULFITE REDUCTASE	Superscaffold4	23352047	23355038	+

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

PE_Scaf9210_0.8

ATGCAGTGGAAAACGATCGGAGGAAGAGGTAGACACGCAATGGTGAACCAAGAAAGCCCTCCAGCCTTAGCAACAATTTAATAAACAAACATGGCGTCAAAAAGTCACTGCAGTGGTGTTAGAGCAATGGCGCGGGGACGAAATTCATATTGGGGGGGCTACCGGAGGGTCAGCACCACTGAAAATTTTTCGCCGCCGCATATCTTTACATCTTCCTTCATCTTGTGGCTGTCTCGGCTGTCACATCGGAAGACGGGGGTGGAGGGGGGTGTTGTTGGAATTGTTTAACGCTGCGCCGCTGTAACTTCAGCTTCTCCGCTGTCTCGACTGTGGACTTATGACACCCGAACACGGGGGACTGTGCTGTTGAAAATTAATTTGTTTACGTCGCACCGCCTATTACTGGGAGGGGGCAAACAATCATAAGATAAATTCCAGGGGGCAGCTTCCCCCTGTTCCCGCGCCTATGAGTTAGAGGAAGGTGGGGGTAACACGGCCCACCTAACAAAAAAGGGTATATGACAAAACTATGCACTTACAGGGAACCAAATAATTATCCACATTAAGACTTGGTATTTGCAAAGAACATATTATATATGCGATAATGACATTCTTGAGGGAGCCATTGTTTATGGTTATCACAAAACGAAATTTTCATCACTGGGGACCGTTTTATCCGCCATTAAGGGTGAAACTGCCCGCTATCGTGGGGTAAAACGGACTCCAGCAACATTAACTAGAAAACCAATTTCTTTCACGAAAATAAAATAGTACATAGTAGAAAAATGTCTCCAATATCATAGATGAAACATTATATTTCTATATATATGGCTCGGTTGAATTTCGCGCTATACCGATGAACGCAATGTATCCAGGATGCTTTGCGTATAGCCGACATGAACCGATCTCCGAACAGGTCAATGCCGTTGGCGGACTCTGTCGTCACTCGGTATGGAAACCGCGGTCACGGTGTATTGACATTAGAACAGAAGCTGCGCCCCCGTCGGGTCGTGACCTAACTTCATCGGAATGAACCGAGCTCACTATTCAGGGCTTTAGTGACAGCGCAGCGATTTTGTAAACATTAAACTGTTGACTTCAAAAGTTGTTTCTGCTCCGTTAATCATTAATTTGGTAGTCAGTGTGTTAGAATAGGGGCCTACATAATACAGTTCATGTATAACTGTAACATGCTATATTTGATTAGTTACTGTCCCACTCGAGAAAGACTATGAACACTGTTTTACGTCTAAGCAAAGATAGTACTGAGACTGATGTAATCACCAGCGCCCCCTGGTGCGCGCAGATGGAGGCATACACGTAATCAACACGCGGATGTTTGTTGAACTGACTAATATACTTGCCAACTTGTGAGTTTCGAAATCCGGGTACGTGTTTCGAGATAGTTCGTGAGCTTCAGCAGTTCGGTCTTGTGGGATTGGATATCGGAAGACGGAGGGTGGGGAAGTGTTGTTTGGAGGTCTGAAGCGAAAATCCGGGAGATTACCTTGTTTTCCGGGAGATTTTCGTCTTCACCGAAAATCCGGGAGATTATAATTATTCTTTTCCGAGAGTTTGGGAGATTCACAACAAATCCGGGAGACTCCCGGAAAATCCGGGAGCGTTGGCAGGTATAGACTAAACCCATGACGATTTTGAAACGTGTAAACATTTAAAAGTTTACACGACTATTGTAGGGGCCTAAGGATTTACACAACGTGTAGTACGTAATGACGAGCGCATGTTATTTCATTGTTGTAGGAATATTTGCGTATTTCGCATTGAGACGCTCACACTGCGCCGCCGAGTCGCCAGATGACGCGACAGCGGGTAGCCGGAGAGCCGATCTGCCGGACATCCGGAGAAGTGACATCGAGCAGCATAAAGATGCGTCAATCGGCGTGTGGATGACATTCCGTGACGGCGTCTACGACGTCACGGAATTCATAGCCGGGCATCCGGGAGGAGACGAGAAGATCCTTCTAGCGGCGGGAGGTGCTGTGGACAGGCACTGGCATTGCTACACCGTCCACCACAAGGCGGACGTCTACGAGACGTTAGAGACGCTGCGGATCGGAAACCTGCACCCGGAGGACGTCACCGAGAGTGTCCCATTCGAGCCGCCTGCTACGGTCGACTCCGTGTCGGTCATCGGGGTTGGCGTGTGGAGGCCCGTGGACATGAGCATCGCTGAGATGAAGACGCGTTTCAAGGTGATCACTGTCAACACTAAAGGTGATACGGCGTGGACGGGCGTGCGGCTGTGCGACGTGCTGTCATACGCCGGGGTGTGGGAGGACGATATCGAATTCGTCGCCTTCCAAGGAGGCGACAGCAACGCCCAGGGGAACCCGTACGAGAAGTCGATCCCGTCCGCGACGGCGTTTGACCCGAAAGAGGAGGTGTTGCTGGCGTTCGAGTTGAACGGAGAGCCGCTAAAAGACCAGCACGGCGCTCCGTGCCGGCTCGTCATACCCGGCTTGTCGAAGTCTCGGCACGTGAAGTGGTTGCAACGGATCACTGTGGTAGCCAGCGGCAGTGCGTAGACTATAGAATGATTCCCAGAGTATTATAGGACTGGGTATCTGATGACTGTTCTAAGGTCGTGTCTTTCTCGATTAAAAGAAAACCGTCAAAGTGTACAATTATTTAATGTCCTTGTTCTCTTGCAAAAGCATCTTGTGTGTCGCGGCGTTTTGCAAATCTTATTATTTTAAATAAAATAACACAAAACTGTTTCTTTTATCCTTATTTGTTTCAGCTGTCGCCCGTGAAACGGTGAACAAAAACATGACAAAGGAATAGGTCTAGGCATGTTGTCTTTGAATGTGGACTGGTTAACACACATTTTGGTTAAAAAATGGGTTTTAGTAATATGGAGATGGTTCCACATTTGAATAATAGCTGTTACATTTTCCAAACACATATTCAGGAAAATAAACGTAACCGAAACAAACTATTATACTGTTGTACTGCCAACATCCGGTCAAAA

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00173	Cyt-b5	Cytochrome b5-like Heme/Steroid binding domain	Domain	Interproscan
PF00174	Oxidored_molyb	Oxidoreductase molybdopterin binding domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000572	Domain	Oxidoreductase, molybdopterin-binding domain	Interproscan
IPR001199	Domain	Cytochrome b5-like heme/steroid binding domain	Interproscan
IPR018506	Binding_site	Cytochrome b5, heme-binding site	Interproscan
IPR036374	Homologous_superfamily	Oxidoreductase, molybdopterin-binding domain superfamily	Interproscan
IPR036400	Homologous_superfamily	Cytochrome b5-like heme/steroid binding domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR19372	SULFITE REDUCTASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005739	Cellular Component	mitochondrion	Interproscan
GO:0006790	Biological Process	sulfur compound metabolic process	Interproscan
GO:0008482	Molecular Function	sulfite oxidase activity	Interproscan
GO:0020037	Molecular Function	heme binding	Interproscan
GO:0043546	Molecular Function	molybdopterin cofactor binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-

Expression pattern

1. Expression trend for PE_Scaf9210_0.8 global RNA-seq network