Detailed information of PE_Scaf9125_0.4 in Paraescarpia echinospica Gene info
Gene IDAnnotationChromosomeStartEndStrand
PE_Scaf9125_0.4B30.2/SPRY DOMAIN-CONTAINING PROTEINSuperscaffold867518766792168-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF06459RR_TM4-6Ryanodine Receptor TM 4-6FamilyInterproscan
PF08454RIH_assocRyR and IP3R Homology associatedRepeatInterproscan
PF13499EF-hand_7EF-hand domain pairDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR002048DomainEF-hand domainInterproscan
IPR009460DomainRyanodine Receptor TM 4-6Interproscan
IPR011992Homologous_superfamilyEF-hand domain pairInterproscan
IPR013662DomainRyR/IP3R Homology associated domainInterproscan
IPR015925FamilyRyanodine/Inositol 1,4,5-trisphosphate receptorInterproscan
IPR018247Binding_siteEF-Hand 1, calcium-binding siteInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR46399B30.2/SPRY DOMAIN-CONTAINING PROTEINInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0005219Molecular Functionryanodine-sensitive calcium-release channel activityInterproscan
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0005790Cellular Componentsmooth endoplasmic reticulumInterproscan
GO:0006816Biological Processcalcium ion transportInterproscan
GO:0006874Biological Processintracellular calcium ion homeostasisInterproscan
GO:0006941Biological Processstriated muscle contractionInterproscan
GO:0014808Biological Processrelease of sequestered calcium ion into cytosol by sarcoplasmic reticulumInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0030018Cellular ComponentZ discInterproscan
GO:0033017Cellular Componentsarcoplasmic reticulum membraneInterproscan
GO:0034704Cellular Componentcalcium channel complexInterproscan
GO:0042383Cellular ComponentsarcolemmaInterproscan
GO:0048763Molecular Functioncalcium-induced calcium release activityInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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Expression pattern
 1. Expression trend for PE_Scaf9125_0.4 global RNA-seq network
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