| Gene ID | Annotation | Chromosome | Start | End | Strand |
|---|---|---|---|---|---|
| PE_Scaf9069_0.5 | CLEAVAGE STIMULATION FACTOR SUBUNIT 2 | Superscaffold12 | 12354689 | 12375362 | + |
| CDS | |||||
| PE_Scaf9069_0.5 | |||||
| Transcript |
| PE_Scaf9069_0.5 |
| Protein |
| PE_Scaf9069_0.5 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00076 | RRM_1 | RNA recognition motif | Domain | Interproscan |
| PF14304 | CSTF_C | Transcription termination and cleavage factor C-terminal | Domain | Interproscan |
| PF14327 | CSTF2_hinge | Hinge domain of cleavage stimulation factor subunit 2 | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR000504 | Domain | RNA recognition motif domain | Interproscan |
| IPR012677 | Homologous_superfamily | Nucleotide-binding alpha-beta plait domain superfamily | Interproscan |
| IPR025742 | Domain | Cleavage stimulation factor subunit 2, hinge domain | Interproscan |
| IPR026896 | Domain | Transcription termination and cleavage factor, C-terminal domain | Interproscan |
| IPR035979 | Homologous_superfamily | RNA-binding domain superfamily | Interproscan |
| IPR038192 | Homologous_superfamily | Transcription termination and cleavage factor, C-terminal domain superfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR45735 | CLEAVAGE STIMULATION FACTOR SUBUNIT 2 | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0003676 | Molecular Function | nucleic acid binding | Interproscan |
| GO:0003723 | Molecular Function | RNA binding | Interproscan |
| GO:0003729 | Molecular Function | mRNA binding | Interproscan |
| GO:0005847 | Cellular Component | mRNA cleavage and polyadenylation specificity factor complex | Interproscan |
| GO:0031124 | Biological Process | mRNA 3'-end processing | Interproscan |
| GO:0098789 | Biological Process | obsolete pre-mRNA cleavage required for polyadenylation | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
| 1. Expression trend for PE_Scaf9069_0.5 global RNA-seq network |