Detailed information of PE_Scaf8880_4.0 in Paraescarpia echinospica Gene info
Gene IDAnnotationChromosomeStartEndStrand
PE_Scaf8880_4.0HIV-INDUCED PROTEIN-7-LIKE PROTEASESuperscaffold13552088635524220+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
Ubiquitin FamilyDUB|OTU|OTU
Ubiquitin FamilyULD|UFD|UBX

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02338OTUOTU-like cysteine proteaseFamilyInterproscan
PF21403OTU1_UBXLOTU1, UBXL domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000626DomainUbiquitin-like domainInterproscan
IPR003323DomainOTU domainInterproscan
IPR013087DomainZinc finger C2H2-typeInterproscan
IPR029071Homologous_superfamilyUbiquitin-like domain superfamilyInterproscan
IPR038765Homologous_superfamilyPapain-like cysteine peptidase superfamilyInterproscan
IPR048857DomainOTU1, Ubl domainInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR13312HIV-INDUCED PROTEIN-7-LIKE PROTEASEInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0004843Molecular Functioncysteine-type deubiquitinase activityInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0016579Biological Processprotein deubiquitinationInterproscan
GO:0030433Biological Processobsolete ubiquitin-dependent ERAD pathwayInterproscan
GO:0030968Biological Processendoplasmic reticulum unfolded protein responseInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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Expression pattern
 1. Expression trend for PE_Scaf8880_4.0 global RNA-seq network
TOP