Detailed information of PE_Scaf8874_1.3 in Paraescarpia echinospica Gene info
Gene IDAnnotationChromosomeStartEndStrand
PE_Scaf8874_1.3HOMEOBOX PROTEIN MSXSuperscaffold46345542763455819-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
Transcription Factors FamilyHomeobox

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00046HomeodomainHomeodomainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000047Conserved_siteHelix-turn-helix motifInterproscan
IPR001356DomainHomeobox domainInterproscan
IPR009057Homologous_superfamilyHomeobox-like domain superfamilyInterproscan
IPR017970Conserved_siteHomeobox, conserved siteInterproscan
IPR020479DomainHomeobox domain, metazoaInterproscan
IPR050674FamilyMsh Homeobox Transcriptional RegulatorsInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR24338HOMEOBOX PROTEIN MSXInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000977Molecular FunctionRNA polymerase II transcription regulatory region sequence-specific DNA bindingInterproscan
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0048598Biological Processembryonic morphogenesisInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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Expression pattern
 1. Expression trend for PE_Scaf8874_1.3 global RNA-seq network
TOP