Detailed information of PE_Scaf8668_2.7 in Paraescarpia echinospica Gene info
Gene IDAnnotationChromosomeStartEndStrand
PE_Scaf8668_2.7UNCHARACTERIZEDSuperscaffold24780682747818355-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
--

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00097zf-C3HC4Zinc finger, C3HC4 type (RING finger)DomainInterproscan
PF02825WWEWWE domainFamilyInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR001841DomainZinc finger, RING-typeInterproscan
IPR004170DomainWWE domainInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR017907Conserved_siteZinc finger, RING-type, conserved siteInterproscan
IPR018123DomainWWE domain, subgroupInterproscan
IPR018957DomainZinc finger, C3HC4 RING-typeInterproscan
IPR033509FamilyE3 ubiquitin-protein ligase RNF146Interproscan
IPR037197Homologous_superfamilyWWE domain superfamilyInterproscan
IPR044110DomainRNF146, RING finger, HC subclassInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR13417UNCHARACTERIZEDInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0004842Molecular Functionubiquitin-protein transferase activityInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0006511Biological Processubiquitin-dependent protein catabolic processInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0016055Biological ProcessWnt signaling pathwayInterproscan
GO:0046872Molecular Functionmetal ion bindingInterproscan
GO:0061630Molecular Functionubiquitin protein ligase activityInterproscan
GO:0072572Molecular Functionpoly-ADP-D-ribose bindingInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
------

Expression pattern
 1. Expression trend for PE_Scaf8668_2.7 global RNA-seq network
TOP