Detailed information of PE_Scaf8615_2.14 in Paraescarpia echinospica Gene info
Gene IDAnnotationChromosomeStartEndStrand
PE_Scaf8615_2.14SLIT HOMOLOGSuperscaffold18390200883933248+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00008EGFEGF-like domainDomainInterproscan
PF01414DSLDelta serrate ligandDomainInterproscan
PF07657MNNLN terminus of Notch ligand C2-like domainDomainInterproscan
PF12661hEGFHuman growth factor-like EGFDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000152PTMEGF-type aspartate/asparagine hydroxylation siteInterproscan
IPR000742DomainEGF-like domainInterproscan
IPR001774DomainDelta/Serrate/lag-2 (DSL) proteinInterproscan
IPR001881DomainEGF-like calcium-binding domainInterproscan
IPR009030Homologous_superfamilyGrowth factor receptor cysteine-rich domain superfamilyInterproscan
IPR011651DomainNotch ligand, N-terminal domainInterproscan
IPR013032Conserved_siteEGF-like, conserved siteInterproscan
IPR018097Conserved_siteEGF-like calcium-binding, conserved siteInterproscan
IPR051355FamilyNotch and Slit guidance proteinInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR45836SLIT HOMOLOGInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0007154Biological Processcell communicationInterproscan
GO:0007219Biological ProcessNotch signaling pathwayInterproscan
GO:0007275Biological Processmulticellular organism developmentInterproscan
GO:0007411Biological Processaxon guidanceInterproscan
GO:0008201Molecular Functionheparin bindingInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0048495Molecular FunctionRoundabout bindingInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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Expression pattern
 1. Expression trend for PE_Scaf8615_2.14 global RNA-seq network
TOP