Detailed information of PE_Scaf8521_1.5 in Paraescarpia echinospica Gene info
Gene IDAnnotationChromosomeStartEndStrand
PE_Scaf8521_1.5ANKYRIN REPEAT-CONTAININGSuperscaffold1223607282396307+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
Ubiquitin FamilyE3|E3 adaptor Cullin RING|SOCS

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF07525SOCS_boxSOCS boxDomainInterproscan
PF12796Ank_2Ankyrin repeats (3 copies)RepeatInterproscan
PF20638ATG5_UblAAutophagy protein ATG5, UblA domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR001496DomainSOCS box domainInterproscan
IPR002110RepeatAnkyrin repeatInterproscan
IPR036036Homologous_superfamilySOCS box-like domain superfamilyInterproscan
IPR036770Homologous_superfamilyAnkyrin repeat-containing domain superfamilyInterproscan
IPR042527Homologous_superfamilyAutophagy protein Atg5, UblA domain superfamilyInterproscan
IPR048939DomainAutophagy protein ATG5, UblA domainInterproscan
IPR051165FamilyMultifunctional Ankyrin Repeat Domain-Containing ProteinInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR24123ANKYRIN REPEAT-CONTAININGInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0035556Biological Processintracellular signal transductionInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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Expression pattern
 1. Expression trend for PE_Scaf8521_1.5 global RNA-seq network
TOP