| Gene ID | Annotation | Chromosome | Start | End | Strand |
|---|---|---|---|---|---|
| PE_Scaf8409_2.9 | PRE-MRNA SPLICING FACTOR-RELATED | Superscaffold1 | 8010748 | 8026109 | - |
| CDS | |||||
| PE_Scaf8409_2.9 | |||||
| Transcript |
| PE_Scaf8409_2.9 |
| Protein |
| PE_Scaf8409_2.9 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF02840 | Prp18 | Prp18 domain | Family | Interproscan |
| PF08799 | PRP4 | pre-mRNA processing factor 4 (PRP4) like | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR004098 | Domain | Prp18 | Interproscan |
| IPR014906 | Domain | Pre-mRNA processing factor 4 (PRP4)-like | Interproscan |
| IPR036285 | Homologous_superfamily | PRP4-like superfamily | Interproscan |
| IPR039979 | Family | Pre-mRNA-splicing factor 18 | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR13007 | PRE-MRNA SPLICING FACTOR-RELATED | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0000350 | Biological Process | generation of catalytic spliceosome for second transesterification step | Interproscan |
| GO:0005681 | Cellular Component | spliceosomal complex | Interproscan |
| GO:0005682 | Cellular Component | U5 snRNP | Interproscan |
| GO:0008380 | Biological Process | RNA splicing | Interproscan |
| GO:0046540 | Cellular Component | U4/U6 x U5 tri-snRNP complex | Interproscan |
| GO:0071021 | Cellular Component | U2-type post-spliceosomal complex | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
| 1. Expression trend for PE_Scaf8409_2.9 global RNA-seq network |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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