Detailed information of PE_Scaf8378_1.9 in Paraescarpia echinospica Gene info
Gene IDAnnotationChromosomeStartEndStrand
PE_Scaf8378_1.9CYTOSINE-SPECIFIC METHYLTRANSFERASESuperscaffold102884636928865884-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00145DNA_methylaseC-5 cytosine-specific DNA methylaseDomainInterproscan
PF01426BAHBAH domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR001025DomainBromo adjacent homology (BAH) domainInterproscan
IPR001525FamilyC-5 cytosine methyltransferaseInterproscan
IPR018117Active_siteDNA methylase, C-5 cytosine-specific, active siteInterproscan
IPR029063Homologous_superfamilyS-adenosyl-L-methionine-dependent methyltransferase superfamilyInterproscan
IPR031303Conserved_siteDNA methylase, C-5 cytosine-specific, conserved siteInterproscan
IPR043151Homologous_superfamilyBromo adjacent homology (BAH) domain superfamilyInterproscan
IPR050390FamilyDNA Cytosine-5 MethyltransferaseInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR10629CYTOSINE-SPECIFIC METHYLTRANSFERASEInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0003682Molecular Functionchromatin bindingInterproscan
GO:0003886Molecular FunctionDNA (cytosine-5-)-methyltransferase activityInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0008168Molecular Functionmethyltransferase activityInterproscan
GO:0010216Biological Processobsolete negative regulation of gene expression via chromosomal DNA cytosine methylationInterproscan
GO:0010424Biological Processobsolete DNA methylation on cytosine within a CG sequenceInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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Expression pattern
 1. Expression trend for PE_Scaf8378_1.9 global RNA-seq network
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