Detailed information of PE_Scaf8326_2.3 in Paraescarpia echinospica Gene info
Gene IDAnnotationChromosomeStartEndStrand
PE_Scaf8326_2.3ENDOPLASMIC RETICULUM-GOLGI INTERMEDIATE COMPARTMENT PROTEINSuperscaffold61946464619484658+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF07970COPIIcoated_ERVEndoplasmic reticulum vesicle transporter FamilyInterproscan
PF13850ERGIC_NEndoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC)DomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR012936DomainEndoplasmic reticulum vesicle transporter, C-terminalInterproscan
IPR039542DomainEndoplasmic reticulum vesicle transporter, N-terminalInterproscan
IPR045888FamilyEndoplasmic reticulum vesicle transporterInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR10984ENDOPLASMIC RETICULUM-GOLGI INTERMEDIATE COMPARTMENT PROTEINInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0005783Cellular Componentendoplasmic reticulumInterproscan
GO:0006888Biological Processendoplasmic reticulum to Golgi vesicle-mediated transportInterproscan
GO:0006890Biological Processretrograde vesicle-mediated transport, Golgi to endoplasmic reticulumInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0030134Cellular ComponentCOPII-coated ER to Golgi transport vesicleInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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Expression pattern
 1. Expression trend for PE_Scaf8326_2.3 global RNA-seq network
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