Detailed information of PE_Scaf8321_0.4 in Paraescarpia echinospica Gene info
Gene IDAnnotationChromosomeStartEndStrand
PE_Scaf8321_0.4INTEGRIN BETA SUBUNITSuperscaffold19222635492248131-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF07965Integrin_B_tailIntegrin beta tail domainDomainInterproscan
PF08725Integrin_b_cytIntegrin beta cytoplasmic domainDomainInterproscan
PF18372I-EGF_1Integrin beta epidermal growth factor like domain 1DomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR012896DomainIntegrin beta subunit, tailInterproscan
IPR014836DomainIntegrin beta subunit, cytoplasmic domainInterproscan
IPR015812FamilyIntegrin beta subunitInterproscan
IPR036349Homologous_superfamilyIntegrin beta tail domain superfamilyInterproscan
IPR040622DomainIntegrin beta, epidermal growth factor-like domain 1Interproscan

PANTHER
PANTHER termDescriptionSource
PTHR10082INTEGRIN BETA SUBUNITInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0005178Molecular Functionintegrin bindingInterproscan
GO:0005925Cellular Componentfocal adhesionInterproscan
GO:0007160Biological Processcell-matrix adhesionInterproscan
GO:0007229Biological Processintegrin-mediated signaling pathwayInterproscan
GO:0008305Cellular Componentintegrin complexInterproscan
GO:0009986Cellular Componentcell surfaceInterproscan
GO:0016477Biological Processcell migrationInterproscan
GO:0033627Biological Processcell adhesion mediated by integrinInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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Expression pattern
 1. Expression trend for PE_Scaf8321_0.4 global RNA-seq network
TOP