Detailed information of PE_Scaf8216_16.13 in Paraescarpia echinospica Gene info
Gene IDAnnotationChromosomeStartEndStrand
PE_Scaf8216_16.13CONTACTIN 5Superscaffold66847272268559460-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
Ubiquitin FamilyUBD|Other|SH3

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF07653SH3_2Variant SH3 domainDomainInterproscan
PF07679I-setImmunoglobulin I-set domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR001452DomainSH3 domainInterproscan
IPR003598DomainImmunoglobulin subtype 2Interproscan
IPR003599DomainImmunoglobulin subtypeInterproscan
IPR007110DomainImmunoglobulin-like domainInterproscan
IPR013098DomainImmunoglobulin I-setInterproscan
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR036028Homologous_superfamilySH3-like domain superfamilyInterproscan
IPR036179Homologous_superfamilyImmunoglobulin-like domain superfamilyInterproscan
IPR050958FamilyCell Adhesion and Cytoskeletal OrganizationInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR45080CONTACTIN 5Interproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0007156Biological Processhomophilic cell adhesion via plasma membrane adhesion moleculesInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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Expression pattern
 1. Expression trend for PE_Scaf8216_16.13 global RNA-seq network
TOP