Detailed information of PE_Scaf8212_1.6 in Paraescarpia echinospica Gene info
Gene IDAnnotationChromosomeStartEndStrand
PE_Scaf8212_1.6PROTEIN DR1Superscaffold104514548545147065-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00808CBFD_NFYB_HMFHistone-like transcription factor (CBF/NF-Y) and archaeal histoneDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR003958DomainTranscription factor CBF/NF-Y/archaeal histone domainInterproscan
IPR009072Homologous_superfamilyHistone-foldInterproscan
IPR042225FamilyNegative cofactor 2 complex subunit betaInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR46138PROTEIN DR1Interproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000122Biological Processnegative regulation of transcription by RNA polymerase IIInterproscan
GO:0016251Molecular FunctionRNA polymerase II general transcription initiation factor activityInterproscan
GO:0017025Molecular FunctionTBP-class protein bindingInterproscan
GO:0017054Cellular Componentnegative cofactor 2 complexInterproscan
GO:0046982Molecular Functionprotein heterodimerization activityInterproscan
GO:0051123Biological ProcessRNA polymerase II preinitiation complex assemblyInterproscan
GO:0140223Molecular Functiongeneral transcription initiation factor activityInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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Expression pattern
 1. Expression trend for PE_Scaf8212_1.6 global RNA-seq network
TOP