Detailed information of PE_Scaf8009_1.6 in Paraescarpia echinospica Gene info
Gene IDAnnotationChromosomeStartEndStrand
PE_Scaf8009_1.6FLAP ENDONUCLEASE FAMILY MEMBERSuperscaffold76888808668912738+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00752XPG_NXPG N-terminal domainFamilyInterproscan
PF00867XPG_IXPG I-regionFamilyInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR006084FamilyXPG/Rad2 endonucleaseInterproscan
IPR006085DomainXPG, N-terminalInterproscan
IPR006086DomainXPG-I domainInterproscan
IPR008918Conserved_siteHelix-hairpin-helix motif, class 2Interproscan
IPR019974Conserved_siteXPG conserved siteInterproscan
IPR023426FamilyFlap endonuclease 1Interproscan
IPR029060Homologous_superfamilyPIN-like domain superfamilyInterproscan
IPR036279Homologous_superfamily5'-3' exonuclease, C-terminal domain superfamilyInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR11081FLAP ENDONUCLEASE FAMILY MEMBERInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000287Molecular Functionmagnesium ion bindingInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0003824Molecular Functioncatalytic activityInterproscan
GO:0004518Molecular Functionnuclease activityInterproscan
GO:0004523Molecular FunctionRNA-DNA hybrid ribonuclease activityInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0008409Molecular Function5'-3' exonuclease activityInterproscan
GO:0016788Molecular Functionhydrolase activity, acting on ester bondsInterproscan
GO:0017108Molecular Function5'-flap endonuclease activityInterproscan
GO:0030145Molecular Functionmanganese ion bindingInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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Expression pattern
 1. Expression trend for PE_Scaf8009_1.6 global RNA-seq network
TOP