Detailed information of PE_Scaf7989_1.3 in Paraescarpia echinospica Gene info
Gene IDAnnotationChromosomeStartEndStrand
PE_Scaf7989_1.3SPLICING FACTOR SF3A-RELATEDSuperscaffold124161230941655006-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
--

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF12108SF3a60_bindingdSplicing factor SF3a60 binding domainDomainInterproscan
PF13297SDE2_2CReplication stress response SDE2 C-terminalDomainInterproscan
PF16837SF3A3Pre-mRNA-splicing factor SF3A3, of SF3a complex, Prp9DomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR021966DomainSplicing factor SF3a60 binding domainInterproscan
IPR025086DomainSDE2-like, C-terminal domainInterproscan
IPR031774DomainSF3A3 domainInterproscan
IPR051421FamilyRNA Processing and DNA Damage Response RegulatorInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR12786SPLICING FACTOR SF3A-RELATEDInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000398Biological ProcessmRNA splicing, via spliceosomeInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0005681Cellular Componentspliceosomal complexInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
------

Expression pattern
 1. Expression trend for PE_Scaf7989_1.3 global RNA-seq network
TOP