Detailed information of PE_Scaf7656_1.4 in Paraescarpia echinospica Gene info
Gene IDAnnotationChromosomeStartEndStrand
PE_Scaf7656_1.4REPLICATION FACTOR A 1, RFA1Superscaffold781929638223456+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01336tRNA_anti-codonOB-fold nucleic acid binding domainDomainInterproscan
PF08646Rep_fac-A_CReplication factor-A C terminal domainFamilyInterproscan
PF16900REPA_OB_2Replication protein A OB domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR004365DomainOB-fold nucleic acid binding domain, AA-tRNA synthetase-typeInterproscan
IPR004591FamilyReplication factor A protein 1Interproscan
IPR012340Homologous_superfamilyNucleic acid-binding, OB-foldInterproscan
IPR013955DomainReplication factor A, C-terminalInterproscan
IPR031657DomainReplication protein A, OB domainInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR23273REPLICATION FACTOR A 1, RFA1Interproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000724Biological Processdouble-strand break repair via homologous recombinationInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0003684Molecular Functiondamaged DNA bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005662Cellular ComponentDNA replication factor A complexInterproscan
GO:0006260Biological ProcessDNA replicationInterproscan
GO:0006281Biological ProcessDNA repairInterproscan
GO:0006289Biological Processnucleotide-excision repairInterproscan
GO:0006310Biological ProcessDNA recombinationInterproscan
GO:0007004Biological Processtelomere maintenance via telomeraseInterproscan
GO:0043047Molecular Functionsingle-stranded telomeric DNA bindingInterproscan
GO:0051321Biological Processmeiotic cell cycleInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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Expression pattern
 1. Expression trend for PE_Scaf7656_1.4 global RNA-seq network
TOP