Gene detail

Detailed information of PE_Scaf7626_1.3 in Paraescarpia echinospica Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
PE_Scaf7626_1.3	FATTY ACID SYNTHASE	Superscaffold4	20491827	20499377	+

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

PE_Scaf7626_1.3

ATGAAAGGATTCGGCATGGCGACCGTCAAATGGCTCTACTCAAAAGGGGTAAAACATGTGGCTATCATCGGACGTAGTGAAGCCACAGAAGAACTGAAAAACGATATCGCTACCCTCAAAGAAGCCGGTTGTCACATCTACTTGTTCAAGGCAGAAGTGTCGAACTACAAGAGAATGGAGGTGGTGATTGGTAATCTTCAACGCAAGCCTCAACCGATCGAAGGCATCTTCCACAGCGCAGAAGTGTACCGCGATGGCTGGATGAAGGAGATGACTCACGAAGACTGGATGCAGGTGATGGTGCCCAAGGCGTACGGAGCCCTCGTTCTACACCAACTGTCGTTGCGCAAGAGTATGACATTGCAGCACTTCGTCACGTACTCGTCACTCACGGGTTTGGTCGGTAATGCGACTCTAGGCAACTACTGCGTAGCGAATGCCTTCCTTCTCAGCTTGGGCGACCTGCGACGTTCACTCGGTCTGCCGAGTAGCGTCGCCTGCTTCGGCGTCATCAACACTACTGGCTTCACCCACCGCAACCAACTCGTCACCACGTACGACAAGAAGGGCATGTACTCGATATCTCAGAAAAAGTCTCTGAACGCAGTAGCAACAATGATGAGTTTCGACATGGACCACCTCGGCATCACTGCCGCATTCCACAACATAAAATTTGTCGAAGCTTTCCGTGGCACAATGCTACAGAACGAAAGGGTTGCAGGCGGATTTCTGTCACGTTTCAAGATGTTGATGGAAGGCGTGACGCTAGGAAACGCGGTGGTGAATTCGATGAAGGATCGCGTTCGCGAAGCAACTCCTGACGAAGGAAAGGAAATAATTATGAATCACCTTACAACGTCTCTGGCGAAACTTCTTGGCGACGAAGAATCAGACAGGTCAGTCGACTCTTCACCTGTCAACCTTGGCGTCGACTCTCTCTTGGCGACTGACCTCAGCAACGAATTAATGACCGATTTCGACATCCAGTTTCTGCCCTTTGAACTGTTGAATGACACAACTACATTGGTCTCCGTCTGCAACTCGATCTATTTAAAGGTGATGTATGATGAAGGCACATCGGTGACAGAAGCAGACAAGGACAACGATGAGGCGCCGAAACTACCCACCTGGATACAGAAAGCCAATAACCCCGACAGCGTTCTTGCACAACTGGTGTGCTTCCCACCCAGAGGCGGTGCCCCCACCAACTTCCGGAACTGGCCGAGTACTTGGAGAAGCTAGGCTGGGAGATGTTCATCGTTGAGCCGCCGGGCTGGGAGGCGAGATTCACGGAGACGCCCGTAGACGACCTGCAAGAGATGGTTCAGTCGGTGAGTGGCGAGTTGACACAGCTTCTCTCGTTCGACCTCTAGGTCTTCTACGGCCACAGTGTAGGTGCGTTACTGGCATTCGAGAGTGCCCACTACCTGCATGCGAAGCACAATCTCTGTCCACGACACCTCTGTGTGGCCGCATGGTCAGCACCTACCATTCCATTCAAACAACCCAAGAACGTACCAAAAGATGTGTTCGACCCGTCGACGCCAATTAATGTTCTCACGTCATACGTTCCTCAGTTCACCTACCTCGACCCGCGTCTGGCTTCCAATCCAGCTATCTTGAAGAGACTGAAGCCGTGCCTGGCTGCGGTTGTAAAGTTCTGCATCGCTTACTCGTACAAGCACGCCGACCGACTGCCTTGCAACATCACGGCGTTGAGCGGAAGCAACGACTTGTTTTTGCCATCCAGCAAAATGGCCGGCTGGGCCAACATGGCGGACAGGAAGTACGAGTACCGCAGCAAAGTCTACCCCGGAGCCCATATGTTCCTACAAGACCAGGATGTCAGCAAGGCGGTTGTCGCAAAGATAAAAACAGACTTCGAAAAGTCGCGAGACGGTTAGTGATGTCATGCTCCAAAACATGAAGGGAGTATTTTCATTCTGAACATAAACATAATATATAAAAAGTATACATGCATAATATTAGTGTGTGTCTGTTTGTGTGTGTGTATGCGTGTGTGTATGTGTGTGTTTGCGTGTGGTGATATACACACACATATATATATATATATATATATATATACATATGGTAACACTTATATATATATATATATATATATATGAGTGTTACCATATGTATATATATATACAGAAATCGCTAATAATATAATATACATCAAAAGTATACATGCACACTATTTCCGTGTGTGTATGTGTGTGTATGCTTGTGGTAATATATATATATATATATACATATGGTAACACTCATATATATATATATATATATATATATATATTACCACACGCTTACACACACATTCACACACGCAAATAGTGTGCATGTATACTTTTGATGTATATTATATTATTAGCGATTTCTAGCACCATGTTCGTGTAGCCGACAGCGGGCAGCACGATCATGGTAATATATTTATATATGGTAATATATATGTGGTAATATATATGCGGCTACATGAACATGATGCTAGAAACCGCTAGCGAATTCCAAGATGGAGACGCGGTAGTGTGCGTGCGCAACTTGCGGTTCACGAAGTTCCTCTTCTTCCCGGCAAACGGCGAGGTGGAACTTCTGACGACAACCTCGAGCGAGCCCAGAAGTGACAACAAACTGTGGTCGGTCGGATTTGGTGCATTCAGGTGTCAATAAATGGCATGCAACAACTTGGAAATGTAACATATGTTTCATCTACAACAAAAAACAGTACACGATGATGCCTAAATTTGGGAATGTTATTCTTTTAAATGATTTTAGCTATTTTACGATTTATTTATAACATTTCATTCCGTTTCACCGAACGTCACCACGCTACTATGTTACTAGAAAATAATAAGTTGCTTAAGTTTACTTACTTAACAAGAACAAGGCTTTGAACAATAACAATGAATATTATGGACATGTTCTCTTATTATAATGTACATGTGATAGAAATTAAACTAAATGTTGCACACATTATGCGTATTCTGTTTCTATGTCATATACATACAATAACAATAATATTAACCCATTTACTACTGCATCAGATAAAAAGTATTAATGTATTTTAAAATGCTAACATATGATATGCTGCTTTTGAAATATATGATAGATACTTTGAGCTTCGTAAAATCCATAGTCATCAAGACAGCGAGATACCATCATTTTTTGAAAGGGAATGCCCTCCTTATGTGCAGAACTGGCACTGAAAATTCAAACCCGTTTGTTTTTTGTCAACTGCTAAGGAGCAATACAATACACTGCATTAACGCTATTGGAAAAATTCAAAGTTATACTACATTATAGTTATATAGTCATTCGCAAATGTTAATTTCCTCATCAAGTACAGTACAGTGGCTCCCATGATAGTGGCATATAATTGTCTTAATGGGAGCCTTCCTGACCTTACAGTGCATATTATATTGTAGTTTATGTGTCTATGAGGGACAATATAAATACTGTATGTATGTCTGTCTGTCTGTCTGACTGTCTGTCTGTCTGTCTGTCTGTGTGTCTGTCTGTCTGTGTGTCTGTCTGTCTGTCTGTCTGTCTGTCTGTCTGTATGTCTGTCTGTCTGTCTGTCTGTCTGTCTGTCTGACTCTGTCTGTCTGCATGTCTGTATGTGTGTTTGTCTGTCTGTCTGTCAGTATGTGTGTCTGTCTGTCTATCTCTCTGTCTGTATGTCTGTCTGTATGTATGTCTGTCTGTCTTGCTGTCTATCTGTCTGTCTATCTAAAAATTCAGTACAGTAACTACATGAATCTATGTTCTATGCACGAATACATATAATTTCGGGATGATTATGTTTTACGCATACACATCCCCAAATTATGTGTGTTCATGAATTTCATGTGTGTGTGTGTGTGTGTGTGTTTGTGTGTGTGTATGTATGTGTGTGTTTGTTTGCGTGAGTGTGTGTGTCTATATGTGTGTGTGTACGTGTGTTTGCCAATGTGTGTGTGTGTGTGCGTGTGTGTGTCTATGTGTGTGTGCGTGTGTGTCTGTGTGTGTGTGTGTATATGTGTGAGTGTCTATGTGTGTGTTTGTGTGTGTGTGTCTTGTGTGTGGGCTTGTGTGAGTGTTTGTGTGTGTGGGTATGTGTGAATGTGTGTGAGTGTGTGTCTGTTTGTGTGTATGTGTGTGTGTGTGTGTGCGTGTATGTGTGTATGTGTGTATGTGTGTGTGTGTGTGTGTGAGTGTGTGTGTGTGTGTGTTTGCCAATGTGTGTGTGTGTGTGTGAGTGTGCGTGTGTGTGCGTGTGTGGCTGTGATTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAGTGTCTGTGTGTGTGTTTGTGTGTGTGTGTGTGTGTCTTGTATGTGGGCTTGTGTGAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTACGTGTATGTACTTGAGTATATTTTTAGTGAAATACCGTAAAACCCGTGTATCTTTGTGGCCATTTTGTTGATGCGAGTAGTTTATTAGAATAACGTAAAGCGTTACCTTTTTGTGAATTTCTACTTGGAGAATTGTCCCAAAAGTGCACTTTCAACGGAGGAACCAGGCATTCTTTTGAAAAAAGGTAATCGTACACGCATACGCACGCGCACACATTTATGCATTATTATTAACGGCAAGCGCGTCTACGGACAAAACACGACAGGCGGTCATATAAGCGGGTCAATGGATTAGTATATTTACCTATTGTGGGCGACATAACACGCCGATAACAGAAATCGTTGTCCTGAGTCATCTCAAGTGACAAGCTAAGACAGTATACAACAAATTCACATGAAATAACTTTAACAACTATTAAAGAAAGAATGAACGAAAAATTGGCCCACAAATCACTGTCCGTTGTATTAATTGTGCCCCGTTATCCGCCAGAAAGAGCCTTGTCATTATTCTCATTCTATATTTCAACCTGCTATGGGAGACCACCTATCTTTGAGAATCCGCTTTGGGTGTATAGAAGATGCGCGCAATTTGATATATCTGGAGAGCCTGAAGGTTTTTTTTTTTGTGCTCTCCAAGAGGGTGTAAATTGCAGTTTTTTTGTGAACCTGAAGGTGTTTGGAGAAGCTCAAAAATGGCATTTCGCAGGGTAGAATATTTTCAAAAAGGCGTGTGTCGCGTCTCGTTTTCGATTAAAACTTCACGCGACCATACGCGAGTCGGATTTTTTAGTCGTATCGGATTTGTGCCGTGACTAATGACCACTTTCGACAATACGTACAATTTTATGTTGAGTAATGGACAGGTCCTGTGAAAGATTATTAATTTGGGGATATGACTGTGTTCGTGGAAGTTGGATTTGCCGTCGCATTGTAACGATACAGATGTTGCACGGCGAGCGGTCATTGCAAACGTCGACAAATGTTGCGCACTCTTCTATTATATTACTTATTGTACAGTAGACACATTGCACAAACGACTCAAGCGCTCGTGGTCACAACAGGTAGTGCCGGTTAGCGCGCCCTATCCCTTACCATGGCGAGCGCCGGTATGGCTTGTTCTTTCAGAGCGTACATCAAACTGCAATCATTGCATTTTTAACTTTTAAATAATTTAATATCACTATAAAGATGATAAACTTCTCTACAAGTTTGTTGATGGATGTACATAGAAATCGGGTTAACTTTTTGAGTTATTGCAGTTAGAACATCGTGAATGCTGAACCTTGACATTGAATATTATTACAACATGCAATTACATCCGCTGCCGCATATATGTGGCAGGATTAAGCATTCGCGATGTTCAAACGGCAATAACTTAAAACTAATAACAAATCCTGGGTACATCAAATCATACATACATACATACATACATATATACATACATTCATACTTACATACTAATGCACATACACGCACGTACGCACAAACGTACACACGCGCGTACACATAAGCTCACACACAAACACGCAAGCACGAATGGACGCAAACACCAACTACGCGTACACACAATCACACCATGAATACGCGCAGAAACAGATGCAACCGCAGAACTACAATTCCTGTTACTGCATGCCGATTGCTAAAATCATTTCGCCTAAGATGAATATGAAATAGATTATAAGTGATAGATATTAGAAAATGTTGTATGAAATCAACAAAAGGGAACCATTTTTAGCTTTCAACATATTATTCATAAAAATAATTGGTGGGCACAAACTCAGAACCTCCATTGCGTGACGCGTCTTATACAATACTCAGTCGTTGGCTTACATTGTGTGGAAGCGCAGTCGAGTAATTGTGTACCCAGTTCGTTTGTTGTGGTTGTTAGCGAGCGGTTTTTTTGTATTGAAAGAAAGCTGAATGACGGAATGACTGGTGGCTACACATAGCGACTGGGAGTATCTTCATCAGAACTTCGTGTACAATACGCTAGGGTTGTGGATTGCGAGTCGAATGAACTGTAGGAGTTGTACTGACGTCACCACAGTTAGTGTCGCTGAGCGCGCCTTATCCTTTAGTACGGCGAGCGGAGGTGCGGCTTGTTGTTTAAGACTGTATATAAAATTGCAGTCTTTGAATCTAATATTTAATTTATTTAGTATATCCGTAAACATAAAAATCTTATCTACAAGTTTGTCGCTGGATGTACACAGGAAACGTTTTAACTTTTTTAGTTATAAACTAAAAAAATCATGGGTACATCCCGTGGCACATTTGTAGGTACGATTATTATCTATACTGTGATATAAACAAATATTAAATCACATTGCAAGTTAGAGTATTCGCAATGTTCAAACGACAATAACTCAACAAGTAAACAAAATTCCTGTATGCGTCCAGCGACACATTAGTAGGTAAGATTATCATATTTACGGCGGTAAAACATTATATTAAATTCCTTGATTGTAATTGTAGGCACGGCGTGAAACACCAACCCGCACAAATGCACGCCATGCTAAATTCTGTAGGTGCTACCTGCGGTGACGTCACATCGACTGCTAGGTGTCACAACAAACAGTGCAAAAAAATGTGCAGAAAAGCGCGACCAAAGGGGGGCTAGAATAGTTTGAAGGATGGGGTAAACATTAGTTTTTTTTAAACAGTTGAACATCAGGAAACTATTTATACATGATTGTTTTATTCAGATTGGGAATAAAACAGGTTACATGACATTAGGATGGATAGCGTGGTGAGGGATCGGGTAAGACGGATCGGGTGGGAGAAATCAGCTGGGAGAGATCGGATGAGAGGAATCGGGTGGGATAGATCGGATGGGAGAGATCGGATTGGAGAGATCGGGGAGGGAGGGATCGGATGTGAGGGATCGGGAGGGGAGGGATCGGGTGGGAGAGATCGGGTGAGGAAGGATCAGGTGGGAGGGATCGGGTGGGAGGGATTGGGTGGGGAGATATCGGGTGGTAGAGATATTGTGGGAGAGATCGGGTTTGGAGAGATTGTGTGGGAGAAACCAGGCGGGGAAATATCCGGTGGGGAAGGGTCTGGTGGAGAGAGATAG

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00550	PP-binding	Phosphopantetheine attachment site	Domain	Interproscan
PF08659	KR	KR domain	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR009081	Domain	Phosphopantetheine binding ACP domain	Interproscan
IPR013968	Domain	Polyketide synthase, ketoreductase domain	Interproscan
IPR020806	Domain	Polyketide synthase, phosphopantetheine-binding domain	Interproscan
IPR029058	Homologous_superfamily	Alpha/Beta hydrolase fold	Interproscan
IPR036291	Homologous_superfamily	NAD(P)-binding domain superfamily	Interproscan
IPR036736	Homologous_superfamily	ACP-like superfamily	Interproscan
IPR050091	Family	Polyketide and Nonribosomal Peptide Biosynthesis Enzymes	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR43775	FATTY ACID SYNTHASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004312	Molecular Function	fatty acid synthase activity	Interproscan
GO:0006633	Biological Process	fatty acid biosynthetic process	Interproscan
GO:0031177	Molecular Function	phosphopantetheine binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-

Expression pattern

1. Expression trend for PE_Scaf7626_1.3 global RNA-seq network