Gene detail

Detailed information of PE_Scaf7367_3.7 in Paraescarpia echinospica Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
PE_Scaf7367_3.7	GLYCOSYLTRANSFERASE	Superscaffold9	29879810	29885519	+

Gene Structure

More details in Jbrowse Sequence

CDS

PE_Scaf7367_3.7

ATGGAGTATAAGAGACAGAGAAAGAAATGGCGTATCAACGAGTCGAAAACTAAGAACCATGCATCGCACGCAGGGAGGGGACTCGCCGGCGACATGATAACGAAGACATGCGGGTATAACGTCGGGACAGACGAGGGTGATGGCCGGGAGATCTTCCACGGCAGCGTTATATGGATACTGCACGTGTTCGTGCTGGCGGGCCGCCTCTGCGTGTGTGGATGTCGCAGTCATTGGTGGATTCTGCACCCGGACGAAGTGTACCAGTCCATTGAAGTGGCCCACTCGGAAGTGTACGGGTACGGCTTCCGCCCCTACGAGTACCTGCGGGCGCCCGCAGTGAACACGACGTCACTCGTCGAGAGACAGGAAGCAGCCCTCGGCATGTACAGTCTGCGCAGCTTCCTCTACCCACGCGTCTTCGTACTCGTCTTCGTGGTGAAGGAAGCCCTGCACATAGGCGCCAACCCCTTCTTGGTGGCGCGAGTGTTCCACGGAGTCGTAGCGGCACACCTGCCCCTTGCTGTGTATTACTTCGCGTCACACCTGCTCTCAAAAGACGTCGCCATGCTCAGCGCCATCTTGACCGCTTTCTCGACTCCCCTCGCAGTGCTTGGCACCCACCCGCTAGTCAACAGTTTCCTCAGCCCAGTCGTATTCATGTGTATGGGTCTTGTCGCAAGACTGCTCGCGACCAGCCGCTCACATCCGTCGCATGAAAAACCGAGGATTGTGAACACGAGTGACGTTCCACGTGGGAACGCCACAAACCGAAGATGCAGGGCAACAACTAATTCCACACGGATTCGTGATAACACAGTTGAGGTGGTGGAAAACCCGCGCTCGCCGTCAACTGGAGACATCGCAACCGGCAACCTGGTCTGGCGTACATACGCCATGCAGATAGCTGTCCACAGATTGCGTCCACTGATTGGCGGATTTGCTGTCAGCCTCGTTGTCGGAGGATTCGACGACTACGTCACTTACGGCACGTGGTTCATATCCCCGTATCGATGGTTCGCATTTAACATCCGACAGGAAACCGCCAATATTCTATTCGGTTGCAAGACGTTCTTCTTTTATTTTCAAGTGATTGTGCTTGATGATCCAATGGCAACTTGTATGTTCCTGTCGGTGGTGATATCTATGGTTCTGTTGACGACTGGGAGAATTCGCTGTTCCACACGTGACCGGAACACAACGGTGGCTTTTAATTCAATTTGTGTCTTGTTATTTATTATCTACAGTATGAAAGGCCACAAAGAACTACGGTTTGTCCACAATGCGTTGACTCTGTATGCCGTGTGCTGTGCCAATGCTATTGTGTTGTTTTACCGATCAGGTTGCCTCTCTGTGTCGCGTGGAAAGACGTTTTACCGAGTTGGCGTATATGCCATTGTTTTTGCGGTTGGACTTAACTGTATCGCCAGATTTCCCAGTCCGTCAAATGGTACCAGTGGACACTGGTCCTATTTAAACGTCGCCGACTCCAACTACATCAACGACTGCCTCGATTTCGTCGGCCGCCAAGAGGACGCCACTGGTGTCTTCCTCGACAGAAGTATCCACGTGACCGCAGGTTATAGCGTTCTGCATAAAGACATACCCATGTTTACCCTTATACACTACGAATTCACAGAGTTTGGCAAAGGAGCAAGGAAAACATTATACCCAAACAGGCTTGTGTTTGGTGGGCATGCAAACACAGTCAACGTATCGATAGTCGGACGAATATCCGAGTTCATTTCTGTCGAGAATTCGCCATTATTGCTGAAGAGACTCATAACAAACCCGGGCTACAACTATCTTATTGTGAAGTTGGATCGTCGACTAGTCAATTTCGGCTACCGGCAAGTATACAAGTCCGGCACGATGCGTGTCATGAAACGAACAGACAACAAAAACGAAAATGAGGCTCTGCGTGAACTGGCCAAGAGCATCCCGATTGGTTCAAACGCCGGCACGCTCGAATACGAAGGCAGTTGGCTGTACTCGTTCAGTTTGCATCGCAAGGCGGTGGAGCGACTTGAAGCGGCGGTTTTCCTCAATCCTCTCCTAATCCGCGCCTACCAGCTGCTCGTCCTCGCTAACACGGAGCTGGGCCGTCAACAAGGCGCCCACAGTGCCTCGCAAGACTGCTGTCGCATACACGGCGCGAAGAGGTGTCGGACTTCCCAGCACAAAGTCGTGTTACATTCTGATTACAACTTCAACGTGGACGTTTGA

Transcript

PE_Scaf7367_3.7

CTCAATTCGTTCACTGACGCTCAATTCAGTCATTTCCCGTCGCTCGTCCAGTAACAAAAAAATCGCCACAACCAACTAAAAATAAACTTAAACGGGTTTTGAATGTTGCGTTGTCTGGTTATTGTAGGCGGCTCCGAAAGCTACAGCCGATGCAGCTGGTGTTTTACACAAAATATAGTGTCTATCTGGTGGAATGACAGTATGCATGCCCGCTAGGTGTCTCGCTATGTCCGGGTCTATAGCATATACCCACTCGGAGGATATCAGACGGTCTGGTCCTAGGCCAGTTCGTGAAGTTTGTGTCGGCTGGTCTGTCGGTCCTGTCTCACTTAACCGGACCTACTTTGGTTCCCCCTCTTCCACATGGAGTATAAGAGACAGAGAAAGAAATGGCGTATCAACGAGTCGAAAACTAAGAACCATGCATCGCACGCAGGGAGGGGACTCGCCGGCGACATGATAACGAAGACATGCGGGTATAACGTCGGGACAGACGAGGGTGATGGCCGGGAGATCTTCCACGGCAGCGTTATATGGATACTGCACGTGTTCGTGCTGGCGGGCCGCCTCTGCGTGTGTGGATGTCGCAGTCATTGGTGGATTCTGCACCCGGACGAAGTGTACCAGTCCATTGAAGGTAACCATATATGCAATATTATAACAACCTTGTCCGTTTCGTTATCCTAGACCAGTTCCACTTCTAAAGTCACCGTATGACTCTCTGTGCGATATCGTATTAATTTCAAGACCTGTACAATGCCCTATCAAGCCCTTTCATCCAAACAACCTGTGTAATTCTTGTAAGAAAACCTATTCAGCTTCGGTCATCTAGTTTAGACTTACTTTTTGTTCCTCGAGTCAACACTAACATTGGAACTTTTGGAATTTGAGCTTTTTCTGTTGCACCAACTCTTTGGCTCCATCTTAGTGTTAGATCAGTTGAACATTTCGCCGTCATTTAAAAACTTATCTTTATAACCTTGCTTATCTGCCATATAACCATAGCAGATCGATTTAACATAATATTACAAAAGTTAACAAATTCTTGTTTAGCGCAGCATCCAGTTATCGGGACTGCTCAAAGTGGTTTTGTACGTCACCTCTGGCAGACCTGTTCATGCTAACACCATCCGGTGTCTCTGGGAAGCGTTTAGCGACGTTGCAATTACTGTTTCTAAATTTTATTTATCCAAACAAATATAATGTAATGGATATATAATTTATTAATTGTAAATATATTGTACAGTAATATATTGTAATTATATATGTGAAAAAGATTGTGATCTGTCTGGATAAATACAATTTAGAAACATCGTTATATATAATGACCATATTTTCATTTGTGGCGAATAAATAATTACTACAAAAATAAAAATAATATATTTACAAACAGTGCATCATAGTATACTAAATGATTTGGTTTATATTACTTCGTGAAAACATAAACAAAAAAGGTGTAAAGAAAATCAATAATTTGCATGCTGTCAGGATTGAACCGATTGTAAAACAAACGCCAATGAACCAACGCGTTTACCAAGTGAGCTATCAGTGCCGGCAGAAATTTGCTGACTGATTTCAGTTGTTATAATAACTTGTACAACTCCTCCTTCATACATCAATATTCTAGTGATATTATGAGATTTTACGTTACTTTCTGTAGCTGGATACGATATATGTTTGCTATGTATGTATATTGGTGTACATCATCTCCCGTTGGTTGCATTCGATATAATTATTCTGCAAACGAGCCCAAGCTCGGCGAAACCTAGTAGACTTGTACTACAAGTTGTAGGCTCATTCGCATTCATTGTTTTGAATAAAATTGAATTCATGTGGAACCGTAAGATAACTGCTTGTTCCTCTATGATGACTAGTGTTTGTATTACATCGGATTATTGCATAACAACTCATTCTGACGCTCGTTTCGACCCCAACATTATCCATGTAAACATGCTCTGAATGCATAGAAAGGGTCGGCCTGCTGCGAGTGTGAGTCATGTGTGACGTTAAGATACCACGTGATCGCCTAGCTCATTAAAATTTTATTTTCCGCGGGAATCGCTACACAGACAGGTTTAAAATCGAATTTATGCTACAAATGTATTTTTCTGTATTTTTTTAATGTTCTCGAATGTTACATGCAATATTAAACTTTCTGTACACATGGAAAACGGATTTTAGCTAATGCCTTGTTTTTATTTCCTTTAATTCCGCCGACTCCGCTGTCGCACTAACGCGCTAATGCGCTGTCCTGCTGTCAGATCATGATATCGGAAAACGGGGGTGGGGTGGGGGAGGGGTGCTGTTGAAAATGTTTCGCTACTGTAATTTCAGCTTAATTCCACCTTCTTCCGAGGACACACTCCAAAGGTCTATGGGGGGCACAATCAAAAAGGTCTAGAGGGCACGCCGAATTCCAAAGGTCTAGGGGGCACGTGCATATGGTCCGCCTATGGTTCGTCCTCTAATCCACCATCTCATGATTACTTCAGTGGCCCACTCGGAAGTGTACGGGTACGGCTTCCGCCCCTACGAGTACCTGCGGGCGCCCGCAGTGAACACGACGTCACTCGTCGAGAGACAGGAAGCAGCCCTCGGCATGTACAGTCTGCGCAGCTTCCTCTACCCACGCGTCTTCGTACTCGTCTTCGTGGTGAAGGAAGCCCTGCACATAGGCGCCAACCCCTTCTTGGTGAGTCGTCAGCGGAGTGTGTAGATTCGGTTTCTGGGGCCGGTTTCATGAAGAGTACTTAAAGTTACGCAATTACTTAGCGTCACGTGTTTGCGTAAACGCTTATATTTAACAAATCACGTCATTTACTAAGACAATCATCTTAGCGTTAAGAACGTTCTTAGCCGTTTTATGAAACCGGCCCCAGGGGCCGGTTTCATGAAGCGTTATAAAGTTACACAATTACTTAGCGTCACGTGTTTGCATAAACTACTATGTTCTCTTATATTTAAAAAATCACGTAATTTACTAAGACAATCATCTTAGCGTTAAGAACGTTCTTAGCCGCTTCATGAAACCGGCCCCGGTTTCTTTAGTCACGCATTCGTGACTGATCGCTGAGAGTGTACGTAAGTTTGTAATGACAAACTGACCCCAGGCAGATTTGTCACCAGTGACCAGTTGACGACACCCTCATTCTGGAAATGTGTCACATGTAGGCCTACCGCACTGTTTTCTGCGTAATCTATAGTTCTTCATTTCCATCTCCCACCGCTGCTATAGGTCGTTCACATTCGGTATCTTCTTCAGCTCCTCTTGAGCAGACATCTTTTCGTTGATCAAGTTCGTCACAATAATGAAAAAAACAGCGGTTAAATTAATTTCCGTGTCTAGGGCTTTCGTCCACTCCAAATTGTCCTGATATCTCTTCCTTGACTTTTAGACCTGCCATCCCTGTCTCAACACCATTCTAACCTCTGCTTCTCCAACTTCATAATTATCATATCATAACATAATTATAAGTGCTAATACTCTTGGCACTGTATCCAATGTCTTTTTAGGTCTTAGGCTTAGCCCCAAATGTAACGTCCACACGTCATATTTGTTGAAGTAGGCCTGCTAGGGCATACCATGACTACATTCAAATAGTGTTGTTTTCGGTGTGTAGGTGGCGCGAGTGTTCCACGGAGTCGTAGCGGCACACCTGCCCCTTGCTGTGTATTACTTCGCGTCACACCTGCTCTCAAAAGACGTCGCCATGCTCAGCGCCATCTTGACCGCTTTCTCGACTCCCCTCGCAGTGCTTGGCACCCACCCGCTAGTCAACAGTTTCCTCAGCCCAGTCGTATTCATGTGTATGGGTCTTGTCGCAAGACTGCTCGCGACCAGCCGCTCACATCCGTCGCATGAAAAACCGAGGATTGTGAACACGAGTGACGTTCCACGTGGGAACGCCACAAACCGAAGATGCAGGGCAACAACTAATTCCACACGGATTCGTGATAACACAGTTGAGGTGGTGGAAAACCCGCGCTCGCCGTCAACTGGAGACATCGCGTACCCCCACAAAAGCCAAAGCGATGCTTCAGCGACAAAACGCGATAACACGGACTCATCTCATTTAATAGGGCAGTTGGAAACATGTGTTACAACAAATATCGCCAATCACGCGGACGATACGAAAAGCTACGTGCATTTGTCAAAAAAAAACGTCAACATTTCTACGGACGAGAAAATAGTAACAAGTACACACCTACTTGTGATCAACAAAACGTGTCGTTCTCTGATGAAATGAAACTGCTTATCTGCGGCATAATTGTTGGTTTAGCATGCTACATTCGATTAGATCTAGTTCTTTGGGTAGGACTGACAATGTTATTGGTGCTGTTTTGCTGTAGAACCGGCAACCTGGTCTGGCGTACATACGCCATGCAGATAGCTGTCCACAGATTGCGTCCACTGATTGGCGGATTTGCTGTCAGCCTCGTTGTCGGAGGATTCGACGACTACGTCACTTACGGCACGTGGTTCATATCCCCGTATCGATGGTTCGCATTTAACATCCGACAGGAAACCGCCAATATTCTATTCGGTTGCAAGACGTTCTTCTTTTATTTTCAAGTGATTGTGCTTGATGATCCAATGGCAACTTGTATGTTCCTGTCGGTGGTGATATCTATGGTTCTGTTGACGACTGGGAGAATTCGCTGTTCCACACGTGACCGGAACACAACGGTGGCTTTTAATTCAATTTGTGTCTTGTTATTTATTATCTACAGTATGAAAGGCCACAAAGAACTACGGTTTGTCCACAATGCGTTGACTCTGTATGCCGTGTGCTGTGCCAATGCTATTGTGTTGTTTTACCGATCAGGTTGCCTCTCTGTGTCGCGTGGAAAGACGTTTTACCGAGTTGGCGTATATGCCATTGTTTTTGCGGTTGGACTTAACTGTATCGCCAGATTTCCCAGTCCGTCAAATGGTACCAGTGGACACTGGTCCTATTTAAACGTCGCCGACTCCAACTACATCAACGACTGCCTCGATTTCGTCGGCCGCCAAGAGGACGCCACTGGTGTCTTCCTCGACAGAAGTATCCACGTGACCGCAGGTTATAGCGTTCTGCATAAAGACATACCCATGTTTACCCTTATACACTACGAATTCACAGAGTTTGGCAAAGGAGCAAGGAAAACATTATACCCAAACAGGCTTGTGTTTGGTGGGCATGCAAACACAGTCAACGTATCGATAGTCGGACGAATATCCGAGTTCATTTCTGTCGAGAATTCGCCATTATTGCTGAAGAGACTCATAACAAACCCGGGCTACAACTATCTTATTGTGAAGTTGGATCGTCGACTAGTCAATTTCGGCTACCGGCAAGTATACAAGTCCGGCACGATGCGTGTCATGAAACGAACAGACAACAAAAACGAAAATGAGGCTCTGCGTGAACTGGCCAAGAGCATCCCGATTGGTTCAAACGCCGGCACGCTCGAATACGAAGGCAGTTGGCTGTACTCGTTCAGTTTGCATCGCAAGGCGGTGGAGCGACTTGAAGCGGCGGTTTTCCTCAATCCTCTCCTAATCCGCGCCTACCAGCTGCTCGTCCTCGCTAACACGGAGCTGGGCCGTCAACAAGGCGCCCACAGTGCCTCGCAAGACTGCTGTCGCATACACGGCGCGAAGAGGTGTCGGACTTCCCAGCACAAAGTCGTGTTACATTCTGATTACAACTTCAACGTGGACGTTTGA

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03901	Glyco_transf_22	Alg9-like mannosyltransferase family	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR005599	Family	GPI mannosyltransferase	Interproscan
IPR011990	Homologous_superfamily	Tetratricopeptide-like helical domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR22760	GLYCOSYLTRANSFERASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000030	Molecular Function	mannosyltransferase activity	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0005789	Cellular Component	endoplasmic reticulum membrane	Interproscan
GO:0016757	Molecular Function	glycosyltransferase activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-

Expression pattern

1. Expression trend for PE_Scaf7367_3.7 global RNA-seq network