Detailed information of PE_Scaf7341_12.2 in Paraescarpia echinospica Gene info
Gene IDAnnotationChromosomeStartEndStrand
PE_Scaf7341_12.2TUMOR NECROSIS FACTOR RECEPTORSuperscaffold102602553526035084-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00020TNFR_c6TNFR/NGFR cysteine-rich regionDomainInterproscan
PF00531DeathDeath domainDomainInterproscan
PF18422TNFR_16_TMTumor necrosis factor receptor member 16 trans-membrane domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000488DomainDeath domainInterproscan
IPR001368DomainTNFR/NGFR cysteine-rich regionInterproscan
IPR011029Homologous_superfamilyDeath-like domain superfamilyInterproscan
IPR022325FamilyTumour necrosis factor receptor 16Interproscan
IPR041448DomainTumor necrosis factor receptor member 16, transmembrane domainInterproscan
IPR052302FamilyNeurotrophin receptor-related death domain-containing proteinInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR46605TUMOR NECROSIS FACTOR RECEPTORInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0005035Molecular Functiondeath receptor activityInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0007165Biological Processsignal transductionInterproscan
GO:0007266Biological ProcessRho protein signal transductionInterproscan
GO:0009986Cellular Componentcell surfaceInterproscan
GO:0015026Molecular Functioncoreceptor activityInterproscan
GO:0048406Molecular Functionnerve growth factor bindingInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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Expression pattern
 1. Expression trend for PE_Scaf7341_12.2 global RNA-seq network
TOP