| Gene ID | Annotation | Chromosome | Start | End | Strand |
|---|---|---|---|---|---|
| PE_Scaf7291_2.3 | CARBON CATABOLITE REPRESSOR PROTEIN 4 | Superscaffold6 | 52847774 | 52866669 | + |
| CDS | |||||
| PE_Scaf7291_2.3 | |||||
| Transcript |
| PE_Scaf7291_2.3 |
| Protein |
| PE_Scaf7291_2.3 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF03372 | Exo_endo_phos | Endonuclease/Exonuclease/phosphatase family | Domain | Interproscan |
| PF21171 | PDE12-like_N | 2',5'-phosphodiesterase 12-like, N-terminal domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR005135 | Domain | Endonuclease/exonuclease/phosphatase | Interproscan |
| IPR036691 | Homologous_superfamily | Endonuclease/exonuclease/phosphatase superfamily | Interproscan |
| IPR048821 | Domain | 2',5'-phosphodiesterase 12-like, N-terminal domain | Interproscan |
| IPR050410 | Family | CCR4/nocturin mRNA turnover and transcription | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR12121 | CARBON CATABOLITE REPRESSOR PROTEIN 4 | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0000175 | Molecular Function | 3'-5'-RNA exonuclease activity | Interproscan |
| GO:0000288 | Biological Process | nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay | Interproscan |
| GO:0003824 | Molecular Function | catalytic activity | Interproscan |
| GO:0005739 | Cellular Component | mitochondrion | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
| 1. Expression trend for PE_Scaf7291_2.3 global RNA-seq network |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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