Detailed information of PE_Scaf7281_0.6 in Paraescarpia echinospica Gene info
Gene IDAnnotationChromosomeStartEndStrand
PE_Scaf7281_0.6CALPAINSuperscaffold93909340739129476-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
--

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00648Peptidase_C2Calpain family cysteine proteaseFamilyInterproscan
PF01067Calpain_IIICalpain large subunit, domain IIIDomainInterproscan
PF13287Fn3_assocFn3 associatedDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000169Active_siteCysteine peptidase, cysteine active siteInterproscan
IPR001300DomainPeptidase C2, calpain, catalytic domainInterproscan
IPR002048DomainEF-hand domainInterproscan
IPR011992Homologous_superfamilyEF-hand domain pairInterproscan
IPR022682DomainPeptidase C2, calpain, large subunit, domain IIIInterproscan
IPR022683DomainPeptidase C2, calpain, domain IIIInterproscan
IPR022684FamilyPeptidase C2, calpain familyInterproscan
IPR026876RepeatFn3 associated repeatInterproscan
IPR033883DomainCalpain subdomain IIIInterproscan
IPR036213Homologous_superfamilyCalpain large subunit, domain III superfamilyInterproscan
IPR038765Homologous_superfamilyPapain-like cysteine peptidase superfamilyInterproscan
IPR050420FamilyCalpainInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR10183CALPAINInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0004198Molecular Functioncalcium-dependent cysteine-type endopeptidase activityInterproscan
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0006508Biological ProcessproteolysisInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
------

Expression pattern
 1. Expression trend for PE_Scaf7281_0.6 global RNA-seq network
TOP