Detailed information of PE_Scaf7089_0.5 in Paraescarpia echinospica Gene info
Gene IDAnnotationChromosomeStartEndStrand
PE_Scaf7089_0.5HERMANSKY-PUDLAK SYNDROME 4 PROTEIN LIGHT-EAR PROTEIN-RELATEDunanchor207674228529+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF19031Intu_longin_1First Longin domain of INTU, CCZ1 and HPS4DomainInterproscan
PF19033Intu_longin_3Intu longin-like domain 3DomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR026091FamilyBLOC-3 complex member HPS4Interproscan
IPR043987DomainCCZ1/INTU/HSP4, first Longin domainInterproscan
IPR043989DomainCCZ1/INTU/HPS4, third Longin domainInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR14407HERMANSKY-PUDLAK SYNDROME 4 PROTEIN LIGHT-EAR PROTEIN-RELATEDInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0005085Molecular Functionguanyl-nucleotide exchange factor activityInterproscan
GO:0005765Cellular Componentlysosomal membraneInterproscan
GO:0006605Biological Processprotein targetingInterproscan
GO:0016192Biological Processvesicle-mediated transportInterproscan
GO:0017137Molecular Functionsmall GTPase bindingInterproscan
GO:0031085Cellular ComponentBLOC-3 complexInterproscan
GO:0031410Cellular Componentcytoplasmic vesicleInterproscan
GO:1903232Biological Processmelanosome assemblyInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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Expression pattern
 1. Expression trend for PE_Scaf7089_0.5 global RNA-seq network
TOP