Detailed information of PE_Scaf7017_5.11 in Paraescarpia echinospica Gene info
Gene IDAnnotationChromosomeStartEndStrand
PE_Scaf7017_5.11FIBRINOGEN/TENASCIN/ANGIOPOEITINSuperscaffold15889400758904491+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00147Fibrinogen_CFibrinogen beta and gamma chains, C-terminal globular domainDomainInterproscan
PF02140Gal_LectinGalactose binding lectin domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000922DomainD-galactoside/L-rhamnose binding SUEL lectin domainInterproscan
IPR002181DomainFibrinogen, alpha/beta/gamma chain, C-terminal globular domainInterproscan
IPR006585DomainFucolectin tachylectin-4 pentraxin-1Interproscan
IPR008979Homologous_superfamilyGalactose-binding-like domain superfamilyInterproscan
IPR014716Homologous_superfamilyFibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 1Interproscan
IPR036056Homologous_superfamilyFibrinogen-like, C-terminalInterproscan
IPR043159Homologous_superfamilyD-galactoside/L-rhamnose binding SUEL lectin domain superfamilyInterproscan
IPR050373FamilyFibrinogen C-terminal domain-containing proteinInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR19143FIBRINOGEN/TENASCIN/ANGIOPOEITINInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0005615Cellular Componentextracellular spaceInterproscan
GO:0030246Molecular Functioncarbohydrate bindingInterproscan
GO:0062023Cellular Componentcollagen-containing extracellular matrixInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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Expression pattern
 1. Expression trend for PE_Scaf7017_5.11 global RNA-seq network
TOP