Detailed information of PE_Scaf6835_5.4 in Paraescarpia echinospica Gene info
Gene IDAnnotationChromosomeStartEndStrand
PE_Scaf6835_5.4-Superscaffold142976770629803077-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
Ubiquitin FamilyE3|E3 activity|HECT

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00536SAM_1SAM domain (Sterile alpha motif)DomainInterproscan
PF00630FilaminFilamin/ABP280 repeatDomainInterproscan
PF00632HECTHECT-domain (ubiquitin-transferase)DomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000569DomainHECT domainInterproscan
IPR001298RepeatFilamin/ABP280 repeatInterproscan
IPR001660DomainSterile alpha motif domainInterproscan
IPR013761Homologous_superfamilySterile alpha motif/pointed domain superfamilyInterproscan
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR014756Homologous_superfamilyImmunoglobulin E-setInterproscan
IPR017868RepeatFilamin/ABP280 repeat-likeInterproscan
IPR035983Homologous_superfamilyHECT, E3 ligase catalytic domainInterproscan

PANTHER
PANTHER termDescriptionSource
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Gene Ontology
GO termsCategoryDescriptionSource
GO:0004842Molecular Functionubiquitin-protein transferase activityInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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Expression pattern
 1. Expression trend for PE_Scaf6835_5.4 global RNA-seq network
TOP