Detailed information of PE_Scaf6672_2.6 in Paraescarpia echinospica Gene info
Gene IDAnnotationChromosomeStartEndStrand
PE_Scaf6672_2.6HEPATOCYTE GROWTH FACTOR-REGULATED TYROSINE KINASE SUBSTRATESuperscaffold32629596426325768+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
Ubiquitin FamilyUBD|Alpha-Helix|VHS

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00790VHSVHS domainRepeatInterproscan
PF01363FYVEFYVE zinc fingerDomainInterproscan
PF12210Hrs_helicalHepatocyte growth factor-regulated tyrosine kinase substrateDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000306DomainFYVE zinc fingerInterproscan
IPR002014DomainVHS domainInterproscan
IPR003903Conserved_siteUbiquitin interacting motifInterproscan
IPR008942Homologous_superfamilyENTH/VHSInterproscan
IPR011011Homologous_superfamilyZinc finger, FYVE/PHD-typeInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR017073FamilyHepatocyte growth factor-regulated tyrosine kinase substrate/VPS27Interproscan
IPR017455DomainZinc finger, FYVE-relatedInterproscan
IPR024641DomainHepatocyte growth factor-regulated tyrosine kinase substrate, helical domainInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR46275HEPATOCYTE GROWTH FACTOR-REGULATED TYROSINE KINASE SUBSTRATEInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0005769Cellular Componentearly endosomeInterproscan
GO:0031623Biological Processreceptor internalizationInterproscan
GO:0032456Biological Processendocytic recyclingInterproscan
GO:0035091Molecular Functionphosphatidylinositol bindingInterproscan
GO:0043130Molecular Functionubiquitin bindingInterproscan
GO:0046872Molecular Functionmetal ion bindingInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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Expression pattern
 1. Expression trend for PE_Scaf6672_2.6 global RNA-seq network
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