Detailed information of PE_Scaf6597_1.2 in Paraescarpia echinospica Gene info
Gene IDAnnotationChromosomeStartEndStrand
PE_Scaf6597_1.2PRE-MRNA PROCESSING PROTEIN PRP39-RELATEDSuperscaffold81963185219667132-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF05843SufSuppressor of forked protein (Suf)RepeatInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR003107RepeatHAT (Half-A-TPR) repeatInterproscan
IPR008847DomainSuppressor of forkedInterproscan
IPR011990Homologous_superfamilyTetratricopeptide-like helical domain superfamilyInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR17204PRE-MRNA PROCESSING PROTEIN PRP39-RELATEDInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000243Cellular Componentcommitment complexInterproscan
GO:0000395Biological ProcessmRNA 5'-splice site recognitionInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005685Cellular ComponentU1 snRNPInterproscan
GO:0006396Biological ProcessRNA processingInterproscan
GO:0030627Molecular Functionpre-mRNA 5'-splice site bindingInterproscan
GO:0071004Cellular ComponentU2-type prespliceosomeInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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Expression pattern
 1. Expression trend for PE_Scaf6597_1.2 global RNA-seq network
TOP