Detailed information of PE_Scaf6199_3.19 in Paraescarpia echinospica Gene info
Gene IDAnnotationChromosomeStartEndStrand
PE_Scaf6199_3.19E3 UBIQUITIN-PROTEIN LIGASE TM129Superscaffold483046138308385+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF10272Tmpp129Putative transmembrane protein precursorFamilyInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR018801FamilyE3 ubiquitin-protein ligase TM129Interproscan

PANTHER
PANTHER termDescriptionSource
PTHR31322E3 UBIQUITIN-PROTEIN LIGASE TM129Interproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0005783Cellular Componentendoplasmic reticulumInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0016567Biological Processprotein ubiquitinationInterproscan
GO:0061630Molecular Functionubiquitin protein ligase activityInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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Expression pattern
 1. Expression trend for PE_Scaf6199_3.19 global RNA-seq network
TOP